RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 CRELD2Q6UXH1 353 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 ALKAL1Q6UXT8 129 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 HS2ST1Q7LGA3 356 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 TMEM192Q8IY95 271 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 CMTR2Q8IYT2 770 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 DHTKD1Q96HY7 919 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 ACAP3Q96P50 834 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 CASD1Q96PB1 797 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 CBWD1Q9BRT8 395 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 MSTO1Q9BUK6 570 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 SEMA6BQ9H3T3 888 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 PCDHA11Q9Y5I1 949 aa12.84□□□□□ -0.35
TRAPPC12-212ENST00000457845 RECQL4O94761 1208 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 CLTAP09496 248 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 FGFR1P11362 822 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 AKAP5P24588 427 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 CCNE1P24864 410 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 TNFSF9P41273 254 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 MATR3P43243 847 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 GATMP50440 423 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 NLRP12P59046 1061 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 EDRF1Q3B7T1 1238 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 SLC10A6Q3KNW5 377 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 FAM117BQ6P1L5 589 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 GPD1LQ8N335 351 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 MLKLQ8NB16 471 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 ZSWIM2Q8NEG5 633 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 HELQQ8TDG4 1101 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 PBX4Q9BYU1 374 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 MIOSQ9NXC5 875 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 HSPBP1Q9NZL4 362 aa12.83□□□□□ -0.36
TRAPPC12-212ENST00000457845 TTC26A0AVF1 554 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 ARL5CA6NH57 179 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 PSMA7O14818 248 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 CLIC2O15247 247 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 CALUO43852 315 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 TLL1O43897 1013 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 EXTL3O43909 919 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 LINC00271P0C7V0 271 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 HARSP12081 509 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 AFF1P51825 1210 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 RABGGTBP53611 331 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 MCCD1P59942 119 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 STIM1Q13586 685 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 ENOX2Q16206 610 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 SEZ6Q53EL9 994 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 CT47A1Q5JQC4 288 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 GLB1LQ6UWU2 654 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 LRRC55Q6ZSA7 311 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 XXYLT1Q8NBI6 393 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 RNF169Q8NCN4 708 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 P2RX5Q93086 422 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 SNX27Q96L92 541 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 ZFP42Q96MM3 310 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 GAD1Q99259 594 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 ZBED2Q9BTP6 218 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 APOL6Q9BWW8 343 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 CXCL16Q9H2A7 254 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 PCIF1Q9H4Z3 704 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 PLEKHA5Q9HAU0 1116 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 CNTN3Q9P232 1028 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 KANSL3Q9P2N6 904 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 PLXNA4Q9HCM2 1894 aa12.82□□□□□ -0.36
TRAPPC12-212ENST00000457845 LAMA2P24043 3122 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 TBKBP1A7MCY6 615 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 PTGESO14684 152 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 NR3C1P04150 777 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 KCNE1P15382 129 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 IBSPP21815 317 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 PBX2P40425 430 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 MLH1P40692 756 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 ACOT2P49753 483 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 YARSP54577 528 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 OSTNP61366 133 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 NAB2Q15742 525 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 RAB30Q15771 203 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 DPCR1Q3MIW9 517 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 NOMO2Q5JPE7 1267 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 CD302Q8IX05 232 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 ABI1Q8IZP0 508 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 CLP1Q92989 425 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 SAAL1Q96ER3 474 aa12.81□□□□□ -0.36
TRAPPC12-212ENST00000457845 MED15Q96RN5 788 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms