RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 INPPL1O15357 1258 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 PRPF6O94906 941 aaKnown RBP11.01□□□□□ -0.65
ATG4A-206ENST00000457035 GCNT3O95395 438 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 ITGA4P13612 1032 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 AKAP5P24588 427 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 HOXD13P35453 343 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 ERVK-21P61565 698 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 MCL1Q07820 350 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 ALCAMQ13740 583 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 TMEM132AQ24JP5 1023 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 DCAF4L1Q3SXM0 396 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 PAN2Q504Q3 1202 aaKnown RBP11.01□□□□□ -0.65
ATG4A-206ENST00000457035 FAM26FQ5R3K3 315 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 L1TD1Q5T7N2 865 aaKnown RBP11.01□□□□□ -0.65
ATG4A-206ENST00000457035 PPP2R2DQ66LE6 453 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 GSTCDQ8NEC7 633 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 ZNF507Q8TCN5 953 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 HVCN1Q96D96 273 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 ADPGKQ9BRR6 497 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 TCHPQ9BT92 498 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 TRIM6Q9C030 488 aaPredicted RBP11.01□□□□□ -0.65
ATG4A-206ENST00000457035 CDT1Q9H211 546 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 IKZF4Q9H2S9 585 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 CWH43Q9H720 699 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 RSAD1Q9HA92 442 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 UBN1Q9NPG3 1134 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
ATG4A-206ENST00000457035 MIOSQ9NXC5 875 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 SNTG2Q9NY99 539 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 GIT1Q9Y2X7 761 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 MRPL42Q9Y6G3 142 aaKnown RBP11.01□□□□□ -0.65
ATG4A-206ENST00000457035 STYXL1Q9Y6J8 313 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 ANK1P16157 1881 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 PDCD11Q14690 1871 aaKnown RBP11.01□□□□□ -0.65
ATG4A-206ENST00000457035 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
ATG4A-206ENST00000457035 A0A0B4J269 797 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 TISP43B9A030 160 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 CLDN3O15551 220 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 RHOBTB3O94955 611 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 RPN1P04843 607 aaKnown RBP11□□□□□ -0.65
ATG4A-206ENST00000457035 MCF2P10911 925 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 ADSSP30520 456 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 BMPR1AP36894 532 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 LIG4P49917 911 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 STK4Q13043 487 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 PSMD2Q13200 908 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 PNOCQ13519 176 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 POSTNQ15063 836 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 NOMO2Q5JPE7 1267 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 ALKAL1Q6UXT8 129 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 ZBTB33Q86T24 672 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 TMEM192Q8IY95 271 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 CEP120Q8N960 986 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 SPATA20Q8TB22 786 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 SCFD1Q8WVM8 642 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 RSPH1Q8WYR4 309 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 ACCSQ96QU6 501 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 TGS1Q96RS0 853 aaKnown RBP11□□□□□ -0.65
ATG4A-206ENST00000457035 GAD1Q99259 594 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 GAS2L1Q99501 681 aaPredicted RBP11□□□□□ -0.65
ATG4A-206ENST00000457035 C17orf80Q9BSJ5 609 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 APOL6Q9BWW8 343 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 CXCL16Q9H2A7 254 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 PRDM12Q9H4Q4 367 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 CERS4Q9HA82 394 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 HCSTQ9UBK5 93 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 PARP2Q9UGN5 583 aa11□□□□□ -0.65
ATG4A-206ENST00000457035 ARL5CA6NH57 179 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 EPOPA6NHQ4 379 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 HNRNPDLO14979 420 aaKnown RBP10.99□□□□□ -0.65
ATG4A-206ENST00000457035 EIF3DO15371 548 aaKnown RBP eCLIP10.99□□□□□ -0.65
ATG4A-206ENST00000457035 MEFVO15553 781 aaPredicted RBP10.99□□□□□ -0.65
ATG4A-206ENST00000457035 FAM189A1O60320 539 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 GRM5P41594 1212 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 KCNB1Q14721 858 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 NOLC1Q14978 699 aaKnown RBP eCLIP10.99□□□□□ -0.65
ATG4A-206ENST00000457035 ZNF568Q3ZCX4 644 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 EPC2Q52LR7 807 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 ARSIQ5FYB1 569 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 XKR4Q5GH76 650 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 SLFN12LQ6IEE8 588 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 GLB1LQ6UWU2 654 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 APBB1IPQ7Z5R6 666 aaPredicted RBP10.99□□□□□ -0.65
ATG4A-206ENST00000457035 ZNF280BQ86YH2 543 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 THNSL1Q8IYQ7 743 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 HACE1Q8IYU2 909 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 ABI1Q8IZP0 508 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 KIAA0895Q8NCT3 520 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 ERCC4Q92889 916 aaPredicted RBP10.99□□□□□ -0.65
ATG4A-206ENST00000457035 BICD1Q96G01 975 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 CCDC34Q96HJ3 373 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 ZFP42Q96MM3 310 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 TMEM206Q9H813 350 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 EXOC1Q9NV70 894 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms