RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 EEPD1Q7L9B9 569 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 CCDC60Q8IWA6 550 aaPredicted RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 RASGEF1CQ8N431 466 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 SLC30A5Q8TAD4 765 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 PLEKHO2Q8TD55 490 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 ACAD9Q9H845 621 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 PLS3P13797 630 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 SCP2P22307 547 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 SOX5P35711 763 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 USP8P40818 1118 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 KCNJ1P48048 391 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 FMO5P49326 533 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 SUPT20HL1Q3ZLR7 823 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 PHLDB3Q6NSJ2 640 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 LRIG3Q6UXM1 1119 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 CCDC121Q6ZUS5 278 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 KCTD17Q8N5Z5 321 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 MOV10L1Q9BXT6 1211 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 GEMIN8Q9NWZ8 242 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 KCND2Q9NZV8 630 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 DBR1Q9UK59 544 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 TPX2Q9ULW0 747 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 FRMD4BQ9Y2L6 1034 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 ACCSLQ4AC99 568 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 TTC27Q6P3X3 843 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 GADL1Q6ZQY3 521 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 SEPT14Q6ZU15 432 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 C4orf19Q8IY42 314 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 FUKQ8N0W3 1084 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 TBC1D31Q96DN5 1066 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 CCDC113Q9H0I3 377 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 SEMA4AQ9H3S1 761 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 MAP3K20Q9NYL2 800 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
LINC00959-201ENST00000456581 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
LINC00959-201ENST00000456581 LCTP09848 1927 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 BHMG1C9JSJ3 638 aaPredicted RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 RPSAP08865 295 aaKnown RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 CHN1P15882 459 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 SLC29A2Q14542 456 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 IFI16Q16666 785 aaKnown RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 ANKRD20A8PQ5CZ79 823 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 MICALCLQ6ZW33 695 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 CYFIP1Q7L576 1253 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 VPS36Q86VN1 386 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 CALR3Q96L12 384 aaKnown RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 YY1AP1Q9H869 796 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 CEP350Q5VT06 3117 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 MYH9P35579 1960 aaKnown RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 PFASO15067 1338 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 ADGRA3Q8IWK6 1321 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 SCTRP47872 440 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 GCLMP48507 274 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 KRT76Q01546 638 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 OTUD6AQ7L8S5 288 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 PHLDB2Q86SQ0 1253 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 CCDC26Q8TAB7 109 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 CTNNBL1Q8WYA6 563 aaPredicted RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 INTS2Q9H0H0 1204 aaKnown RBP13.34□□□□□ -0.27
LINC00959-201ENST00000456581 ADAM7Q9H2U9 754 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 ZDHHC18Q9NUE0 388 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 HOXC10Q9NYD6 342 aa13.34□□□□□ -0.27
LINC00959-201ENST00000456581 STBD1O95210 358 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 DRD4P21917 467 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 NPTX2P47972 431 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 ACTR2P61160 394 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 PPATQ06203 517 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 BFSP1Q12934 665 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 LRRC14Q15048 493 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 CYB5D1Q6P9G0 228 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 ZDHHC24Q6UX98 284 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 CCDC25Q86WR0 208 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 JPH1Q9HDC5 661 aaPredicted RBP13.33□□□□□ -0.28
LINC00959-201ENST00000456581 PTPRFP10586 1907 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 EMSYQ7Z589 1322 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 CCDC188H7C350 402 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 CES2O00748 559 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 LYPLA2O95372 231 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 ADRB2P07550 413 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 FDX1P10109 184 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 ADSSP30520 456 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms