RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 SLC27A1Q6PCB7 646 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 PRSS55Q6UWB4 352 aaPredicted RBP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 SLFN12Q8IYM2 578 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 MAML2Q8IZL2 1156 aaPredicted RBP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 NAP1L4Q99733 375 aaKnown RBP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 EIF2AK1Q9BQI3 630 aaKnown RBP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 RPP25Q9BUL9 199 aaKnown RBP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 APOL6Q9BWW8 343 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.22□□□□□ -0.29
LMCD1-206ENST00000456506 TPCN1Q9ULQ1 816 aa13.22□□□□□ -0.29
LMCD1-206ENST00000456506 KIF26AQ9ULI4 1882 aaPredicted RBP13.21□□□□□ -0.29
LMCD1-206ENST00000456506 POTEMA6NI47 508 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 PFKFB2O60825 505 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 DGAT1O75907 488 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 EDN1P05305 212 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 IGFBP6P24592 240 aaPredicted RBP13.21□□□□□ -0.29
LMCD1-206ENST00000456506 STARD6P59095 220 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
LMCD1-206ENST00000456506 CPLX2Q6PUV4 134 aaKnown RBP13.21□□□□□ -0.29
LMCD1-206ENST00000456506 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 TPH2Q8IWU9 490 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 ST13P5Q8NFI4 369 aaPredicted RBP13.21□□□□□ -0.29
LMCD1-206ENST00000456506 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.29
LMCD1-206ENST00000456506 FGF14Q92915 247 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 MTMR9Q96QG7 549 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 CLSTN3Q9BQT9 956 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 PDRG1Q9NUG6 133 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 KLK14Q9P0G3 267 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 NUMBLQ9Y6R0 609 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 R4GN57 208 aa13.21□□□□□ -0.29
LMCD1-206ENST00000456506 A0A087WWV3 80 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 ADAM12O43184 909 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 KIF4AO95239 1232 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 NPTXRO95502 500 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 DCNP07585 359 aaKnown RBP13.2□□□□□ -0.3
LMCD1-206ENST00000456506 SP9P0CG40 484 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 SPATA31C1P0DKV0 1188 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 TFDP1Q14186 410 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 HSP90AA2PQ14568 343 aaPredicted RBP13.2□□□□□ -0.3
LMCD1-206ENST00000456506 ELMSAN1Q6PJG2 1045 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 POTEHQ6S545 545 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
LMCD1-206ENST00000456506 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
LMCD1-206ENST00000456506 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
LMCD1-206ENST00000456506 FOXQ1Q9C009 403 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 FZD8Q9H461 694 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
LMCD1-206ENST00000456506 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-206ENST00000456506 CEP250Q9BV73 2442 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 LRRN2O75325 713 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 CDKL5O76039 1030 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
LMCD1-206ENST00000456506 NTHL1P78549 312 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 TUSC3Q13454 348 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-206ENST00000456506 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 RMDN1Q96DB5 314 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-206ENST00000456506 POLR3FQ9H1D9 316 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-206ENST00000456506 TTC12Q9H892 705 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-206ENST00000456506 PCDHA12Q9UN75 941 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 ZFP37Q9Y6Q3 630 aaPredicted RBP13.19□□□□□ -0.3
LMCD1-206ENST00000456506 DENND4CQ5VZ89 1909 aa13.19□□□□□ -0.3
LMCD1-206ENST00000456506 TSC2P49815 1807 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 SF3B1O75533 1304 aaKnown RBP eCLIP13.18□□□□□ -0.3
LMCD1-206ENST00000456506 KMT2BQ9UMN6 2715 aaPredicted RBP13.18□□□□□ -0.3
LMCD1-206ENST00000456506 NR1I2O75469 434 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
LMCD1-206ENST00000456506 LARGE1O95461 756 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 POU2F2P09086 479 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
LMCD1-206ENST00000456506 FSHRP23945 695 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 HOXA9P31269 272 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 GPC5P78333 572 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 CREMQ03060 361 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 DCLRE1AQ6PJP8 1040 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 HACE1Q8IYU2 909 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 HASPINQ8TF76 798 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 BSNDQ8WZ55 320 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 FGF13Q92913 245 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 CCDC113Q9H0I3 377 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 PDZD7Q9H5P4 517 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 PIDD1Q9HB75 910 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 CDH7Q9ULB5 785 aa13.18□□□□□ -0.3
LMCD1-206ENST00000456506 CASTOR2A6NHX0 329 aa13.17□□□□□ -0.3
LMCD1-206ENST00000456506 SHISA7A6NL88 538 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms