RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CMTR2Q8IYT2 770 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ZNF713Q8N859 430 aaPredicted RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 TBCKQ8TEA7 893 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 SNX29Q8TEQ0 813 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 LENG9Q96B70 501 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 FAM122AQ96E09 287 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 APOL5Q9BWW9 433 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 PLVAPQ9BX97 442 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 AGXT2Q9BYV1 514 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 UPF3BQ9BZI7 483 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 LMAN2LQ9H0V9 348 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 GLT8D2Q9H1C3 349 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 CHRDQ9H2X0 955 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ADAMTS10Q9H324 1103 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 UNC45AQ9H3U1 944 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 DISC1Q9NRI5 854 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 RGS18Q9NS28 235 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 NRBP2Q9NSY0 501 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 GJB4Q9NTQ9 266 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 TBC1D22BQ9NU19 505 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 NDFIP2Q9NV92 336 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 MARK1Q9P0L2 795 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 ZFATQ9P243 1243 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 PARP2Q9UGN5 583 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 BARX2Q9UMQ3 279 aaPredicted RBP5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 AKT3Q9Y243 479 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 RWDD3Q9Y3V2 267 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 DOCK6Q96HP0 2047 aa5.29□□□□□ -1.56
GTF3C3-208ENST00000455546 NT5C1B-RDH14C9J2C7 533 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 EREGO14944 169 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 MAGEB2O15479 319 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 NCK2O43639 380 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 GAS7O60861 476 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 MMP20O60882 483 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 CPNE3O75131 537 aaKnown RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 FGF18O76093 207 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 STBD1O95210 358 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 TDP2O95551 362 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 GLP2RO95838 553 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 RPLP2P05387 115 aaKnown RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 ZSCAN20P17040 1043 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 IFNAR1P17181 557 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 FGFR3P22607 806 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 NDUFV1P49821 464 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 USP11P51784 963 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 RCAN1P53805 252 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 FAM189BP81408 668 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 CTBSQ01459 385 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 TBC1D8BQ0IIM8 1120 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 CCINQ13939 588 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 SMAD2Q15796 467 aaKnown RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 MTERF2Q49AM1 385 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 LRCH2Q5VUJ6 765 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 PDE12Q6L8Q7 609 aaKnown RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 MIER3Q7Z3K6 550 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 KSR1Q8IVT5 923 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 ADHFE1Q8IWW8 467 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 SMAP1Q8IYB5 467 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 THNSL1Q8IYQ7 743 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 FBXL16Q8N461 479 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 COLGALT1Q8NBJ5 622 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 RNF169Q8NCN4 708 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 VN1R2Q8NFZ6 395 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 EPS8L3Q8TE67 593 aaKnown RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 CCDC12Q8WUD4 166 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 SLC5A5Q92911 643 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 P2RX5Q93086 422 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 CASD1Q96PB1 797 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 PNMA5Q96PV4 448 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 RNF26Q9BY78 433 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 GSX2Q9BZM3 304 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 CWH43Q9H720 699 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 TLE6Q9H808 572 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 ATP6V0A4Q9HBG4 840 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 NPHS2Q9NP85 383 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 ABI2Q9NYB9 513 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 TCEAL9Q9UHQ7 104 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 MUTYHQ9UIF7 546 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 CD207Q9UJ71 328 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 PCDHA4Q9UN74 947 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 KCNJ14Q9UNX9 436 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 PCDHB12Q9Y5F1 795 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 C5orf42Q9H799 3197 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 COL1A2P08123 1366 aa5.28□□□□□ -1.56
GTF3C3-208ENST00000455546 TRANK1O15050 2925 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 A0A087WWV3 80 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 HIDE1A8MVS5 230 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PRR33A8MZF0 331 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 WDR64B1ANS9 1081 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CPLX1O14810 134 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 DCXO43602 365 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PRPF40AO75400 957 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PSMD10O75832 226 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 REC8O95072 547 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 ALADP13716 330 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 ACPPP15309 386 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 SP100P23497 879 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 EIF4BP23588 611 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TMOD1P28289 359 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms