RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 TRAK2O60296 914 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 RECQL4O94761 1208 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 MBD3O95983 291 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 MYL1P05976 194 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 GALTP07902 379 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 PTMSP20962 102 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 AFMP43652 599 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 SLC11A1P49279 550 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 ZNF568Q3ZCX4 644 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 CNNM4Q6P4Q7 775 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 GSTCDQ8NEC7 633 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 KCNN1Q92952 543 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 FAM193BQ96PV7 902 aaPredicted RBP16.06■□□□□ 0.16
VPS16-205ENST00000453689 C7orf25Q9BPX7 421 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 CDT1Q9H211 546 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 TLR9Q9NR96 1032 aa16.06■□□□□ 0.16
VPS16-205ENST00000453689 MTCL1Q9Y4B5 1905 aaKnown RBP16.06■□□□□ 0.16
VPS16-205ENST00000453689 PLXNA3P51805 1871 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 PROZP22891 400 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 ERVFC1P60507 584 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 KRT17Q04695 432 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 DSC1Q08554 894 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 APBB1IPQ7Z5R6 666 aaPredicted RBP16.05■□□□□ 0.16
VPS16-205ENST00000453689 TMEM173Q86WV6 379 aaPredicted RBP16.05■□□□□ 0.16
VPS16-205ENST00000453689 SFR1Q86XK3 245 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 FAM178BQ8IXR5 827 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
VPS16-205ENST00000453689 GRAMD1CQ8IYS0 662 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 BCL7CQ8WUZ0 217 aaPredicted RBP16.05■□□□□ 0.16
VPS16-205ENST00000453689 ZBTB45Q96K62 511 aaPredicted RBP16.05■□□□□ 0.16
VPS16-205ENST00000453689 RPS6KC1Q96S38 1066 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
VPS16-205ENST00000453689 GDAQ9Y2T3 454 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 PCDHGC5Q9Y5F6 944 aa16.05■□□□□ 0.16
VPS16-205ENST00000453689 CARNS1A5YM72 827 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 TOM1L1O75674 476 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 SCP2P22307 547 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 NMT1P30419 496 aaKnown RBP16.04■□□□□ 0.16
VPS16-205ENST00000453689 GRM5P41594 1212 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 ASIC1P78348 528 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 GRIK3Q13003 919 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 CUL4BQ13620 913 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 POSTNQ15063 836 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 MPZL3Q6UWV2 235 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 ZPBP2Q6X784 338 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 ADGRD2Q7Z7M1 963 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 ZBTB33Q86T24 672 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 COLGALT2Q8IYK4 626 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 CEP120Q8N960 986 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 GPT2Q8TD30 523 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 TMEM169Q96HH4 297 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 IGSF21Q96ID5 467 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 CXCL16Q9H2A7 254 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 PUF60Q9UHX1 559 aaKnown RBP16.04■□□□□ 0.16
VPS16-205ENST00000453689 TBX20Q9UMR3 447 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 COG5Q9UP83 839 aa16.04■□□□□ 0.16
VPS16-205ENST00000453689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.03■□□□□ 0.16
VPS16-205ENST00000453689 FRMD3A2A2Y4 597 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 PTGESO14684 152 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 NRP1O14786 923 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 FSCN2O14926 492 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 ALDH2P05091 517 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 MCF2P10911 925 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 IDEP14735 1019 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 CASP1P29466 404 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 GTF2F1P35269 517 aaKnown RBP eCLIP16.03■□□□□ 0.16
VPS16-205ENST00000453689 TFF2Q03403 129 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 HYAL1Q12794 435 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 NOLC1Q14978 699 aaKnown RBP eCLIP16.03■□□□□ 0.16
VPS16-205ENST00000453689 PLPP4Q5VZY2 271 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
VPS16-205ENST00000453689 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 ATXN2LQ8WWM7 1075 aaKnown RBP16.03■□□□□ 0.16
VPS16-205ENST00000453689 HLA-CQ95604 372 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 BICD1Q96G01 975 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 TCHPQ9BT92 498 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 ANKFY1Q9P2R3 1169 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 SEL1LQ9UBV2 794 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 FAN1Q9Y2M0 1017 aa16.03■□□□□ 0.16
VPS16-205ENST00000453689 SPTBN5Q9NRC6 3674 aaKnown RBP16.03■□□□□ 0.16
VPS16-205ENST00000453689 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.02■□□□□ 0.16
VPS16-205ENST00000453689 PIGRP01833 764 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.16
VPS16-205ENST00000453689 GAP43P17677 238 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 OR1G1P47890 313 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 OSTNP61366 133 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 GTF2BQ00403 316 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 DPYDQ12882 1025 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 COL19A1Q14993 1142 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 ZC2HC1CQ53FD0 456 aaPredicted RBP16.02■□□□□ 0.16
VPS16-205ENST00000453689 UNC13DQ70J99 1090 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 DDX53Q86TM3 631 aaKnown RBP16.02■□□□□ 0.16
VPS16-205ENST00000453689 MICAL1Q8TDZ2 1067 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 PPP2R3CQ969Q6 453 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 TCF25Q9BQ70 676 aa16.02■□□□□ 0.16
VPS16-205ENST00000453689 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms