RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 IRS1P35568 1242 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 AFF1P51825 1210 aaKnown RBP21.86■■□□□ 1.09
COL9A3-202ENST00000452372 ADAM15Q13444 863 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 CSPP1Q1MSJ5 1256 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 HERC4Q5GLZ8 1057 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-202ENST00000452372 CCDC65Q8IXS2 484 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 GAD1Q99259 594 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 TCHPQ9BT92 498 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 OLFML3Q9NRN5 406 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 SNTG2Q9NY99 539 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 PARP2Q9UGN5 583 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 USP25Q9UHP3 1055 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 SERTAD1Q9UHV2 236 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 ZMYM2Q9UBW7 1377 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 TRIOO75962 3097 aa21.86■■□□□ 1.09
COL9A3-202ENST00000452372 ABLIM1O14639 778 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 ACTN4O43707 911 aaKnown RBP21.85■■□□□ 1.09
COL9A3-202ENST00000452372 TOM1L1O75674 476 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 NDUFA8P51970 172 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 ZNF568Q3ZCX4 644 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 KCNT2Q6UVM3 1135 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 MPZL3Q6UWV2 235 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 EP400NLQ6ZTU2 488 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 CEP57L1Q8IYX8 460 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 FSIP1Q8NA03 581 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 ZNF558Q96NG5 402 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 CDT1Q9H211 546 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 MRPL44Q9H9J2 332 aaKnown RBP21.85■■□□□ 1.09
COL9A3-202ENST00000452372 MIOSQ9NXC5 875 aa21.85■■□□□ 1.09
COL9A3-202ENST00000452372 PIGRP01833 764 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 MCF2P10911 925 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 MLH1P40692 756 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 SYKP43405 635 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 RNASELQ05823 741 aaKnown RBP21.84■■□□□ 1.09
COL9A3-202ENST00000452372 ZC2HC1CQ53FD0 456 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-202ENST00000452372 ADGRD2Q7Z7M1 963 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 MAP4K3Q8IVH8 894 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 GSTCDQ8NEC7 633 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 POF1BQ8WVV4 589 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 MRPS27Q92552 414 aaKnown RBP21.84■■□□□ 1.09
COL9A3-202ENST00000452372 HVCN1Q96D96 273 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 ZBTB45Q96K62 511 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-202ENST00000452372 ZFP42Q96MM3 310 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 STRA6Q9BX79 667 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 IGFLR1Q9H665 355 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 NRDE2Q9H7Z3 1164 aa21.84■■□□□ 1.09
COL9A3-202ENST00000452372 CARNS1A5YM72 827 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 C19orf67A6NJJ6 358 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 GPR37L1O60883 481 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 TBX10O75333 385 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 PPP1R37O75864 691 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 DDHD2O94830 711 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 CSPG5O95196 566 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 POMCP01189 267 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 AFMP43652 599 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 ALDH7A1P49419 539 aaKnown RBP21.83■■□□□ 1.09
COL9A3-202ENST00000452372 BCAR1P56945 870 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 ZBTB33Q86T24 672 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 ZNF280BQ86YH2 543 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 BICD1Q96G01 975 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 KLK14Q9P0G3 267 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 TBC1D7Q9P0N9 293 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 PCDHGC5Q9Y5F6 944 aa21.83■■□□□ 1.09
COL9A3-202ENST00000452372 TDRD15B5MCY1 1934 aaKnown RBP21.82■■□□□ 1.08
COL9A3-202ENST00000452372 GOLGA6L4A6NEF3 574 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 HNRNPDLO14979 420 aaKnown RBP21.82■■□□□ 1.08
COL9A3-202ENST00000452372 CLDN3O15551 220 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 FGF18O76093 207 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 RECQL4O94761 1208 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 PPM1AP35813 382 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 GRM5P41594 1212 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 LIG4P49917 911 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 SCNN1GP51170 649 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 ASIC1P78348 528 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 ZP2Q05996 745 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 MCL1Q07820 350 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 COASYQ13057 564 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 TPRNQ4KMQ1 711 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 THNSL1Q8IYQ7 743 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 PAGE5Q96GU1 130 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 FAM193BQ96PV7 902 aaPredicted RBP21.82■■□□□ 1.08
COL9A3-202ENST00000452372 GBP3Q9H0R5 595 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 GOLPH3LQ9H4A5 285 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 SPG21Q9NZD8 308 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 GDAQ9Y2T3 454 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 PCDHB13Q9Y5F0 798 aa21.82■■□□□ 1.08
COL9A3-202ENST00000452372 ZC3H11AO75152 810 aaKnown RBP eCLIP21.81■■□□□ 1.08
COL9A3-202ENST00000452372 GALTP07902 379 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 PBX3P40426 434 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 PLCB3Q01970 1234 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 UBE3AQ05086 875 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 CUL4BQ13620 913 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 ALCAMQ13740 583 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 CLUL1Q15846 466 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 UNC13DQ70J99 1090 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 SLC39A11Q8N1S5 342 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 CEP120Q8N960 986 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 MSLNLQ96KJ4 702 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 RPS6KC1Q96S38 1066 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 TMEM175Q9BSA9 504 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms