RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CALML4Q96GE6 196 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 AK8Q96MA6 479 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 MRPL4Q9BYD3 311 aaKnown RBP16.8■□□□□ 0.28
CHD3-205ENST00000449744 TMEM134Q9H6X4 195 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 ADAM28Q9UKQ2 775 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 TNFSF13BQ9Y275 285 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 NR2E1Q9Y466 385 aa16.8■□□□□ 0.28
CHD3-205ENST00000449744 ARIH1Q9Y4X5 557 aaPredicted RBP16.8■□□□□ 0.28
CHD3-205ENST00000449744 CASTOR2A6NHX0 329 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 F8W810 466 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 PLA2G4BP0C869 781 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 SP100P23497 879 aaPredicted RBP16.79■□□□□ 0.28
CHD3-205ENST00000449744 GUCY2CP25092 1073 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 UBA7P41226 1012 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 CLCN4P51793 760 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 DSG1Q02413 1049 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 HSP90AA2PQ14568 343 aaPredicted RBP16.79■□□□□ 0.28
CHD3-205ENST00000449744 USP41Q3LFD5 358 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 ELMSAN1Q6PJG2 1045 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
CHD3-205ENST00000449744 DAW1Q8N136 415 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 RABGGTAQ92696 567 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 BACH2Q9BYV9 841 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 POMKQ9H5K3 350 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 SFXN1Q9H9B4 322 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 DPP7Q9UHL4 492 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 CDH22Q9UJ99 828 aa16.79■□□□□ 0.28
CHD3-205ENST00000449744 SF3B1O75533 1304 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHD3-205ENST00000449744 SFI1A8K8P3 1242 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 SLC26A4O43511 780 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 WEE2P0C1S8 567 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 SMTNP53814 917 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 YARSP54577 528 aaKnown RBP16.78■□□□□ 0.28
CHD3-205ENST00000449744 MAPK7Q13164 816 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 ZNF568Q3ZCX4 644 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 KANK3Q6NY19 840 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 TMC5Q6UXY8 1006 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 EDAQ92838 391 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 ACO2Q99798 780 aaKnown RBP16.78■□□□□ 0.28
CHD3-205ENST00000449744 TCHPQ9BT92 498 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
CHD3-205ENST00000449744 GPR62Q9BZJ7 368 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHD3-205ENST00000449744 CHST7Q9NS84 486 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 KCND2Q9NZV8 630 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 ARHGAP28Q9P2N2 729 aa16.78■□□□□ 0.28
CHD3-205ENST00000449744 PTGESO14684 152 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 SLC16A4O15374 487 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 TEX28O15482 410 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 EFEMP2O95967 443 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 GLUD1P00367 558 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 PLS3P13797 630 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 STRN3Q13033 797 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
CHD3-205ENST00000449744 TMEM119Q4V9L6 283 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 HASPINQ8TF76 798 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 SPIRE2Q8WWL2 714 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 RIN2Q8WYP3 895 aaPredicted RBP16.77■□□□□ 0.28
CHD3-205ENST00000449744 B3GALT6Q96L58 329 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 TARS2Q9BW92 718 aaKnown RBP16.77■□□□□ 0.28
CHD3-205ENST00000449744 RXFP1Q9HBX9 757 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 TOPORSQ9NS56 1045 aaPredicted RBP16.77■□□□□ 0.28
CHD3-205ENST00000449744 CACNG4Q9UBN1 327 aa16.77■□□□□ 0.28
CHD3-205ENST00000449744 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
CHD3-205ENST00000449744 GRM5P41594 1212 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 SLC12A3P55017 1021 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 CREMQ03060 361 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 GLRA4Q5JXX5 417 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 GPR149Q86SP6 731 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 PAAF1Q9BRP4 392 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
CHD3-205ENST00000449744 CDT1Q9H211 546 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 MAN1C1Q9NR34 630 aa16.76■□□□□ 0.27
CHD3-205ENST00000449744 LARSQ9P2J5 1176 aaKnown RBP16.76■□□□□ 0.27
CHD3-205ENST00000449744 H0YCG3 227 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 KIF4AO95239 1232 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 MCF2P10911 925 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 HARSP12081 509 aaKnown RBP16.75■□□□□ 0.27
CHD3-205ENST00000449744 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
CHD3-205ENST00000449744 OSTNP61366 133 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 ZXDAP98168 799 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
CHD3-205ENST00000449744 ELAVL2Q12926 359 aaKnown RBP16.75■□□□□ 0.27
CHD3-205ENST00000449744 DHX8Q14562 1220 aaKnown RBP16.75■□□□□ 0.27
CHD3-205ENST00000449744 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 TAS1R3Q7RTX0 852 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 CEP57Q86XR8 500 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 PALB2Q86YC2 1186 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 GLYCTKQ8IVS8 523 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 CEP120Q8N960 986 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 TDRD5Q8NAT2 981 aaKnown RBP16.75■□□□□ 0.27
CHD3-205ENST00000449744 CXCL16Q9H2A7 254 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 FNIP2Q9P278 1114 aa16.75■□□□□ 0.27
CHD3-205ENST00000449744 NPHP3-ACAD11A0A0J9YXS1 232 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms