RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PBKQ96KB5 322 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 FBXO40Q9UH90 709 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 SNX24Q9Y343 169 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 NCANO14594 1321 aa15.93■□□□□ 0.14
SF1-211ENST00000448404 TNFSF9P41273 254 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 OSTNP61366 133 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 NNTQ13423 1086 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 CEP85LQ5SZL2 805 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 GJC2Q5T442 439 aaPredicted RBP15.92■□□□□ 0.14
SF1-211ENST00000448404 OTUD6AQ7L8S5 288 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 FBXL13Q8NEE6 735 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 COPS5Q92905 334 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 PCYT2Q99447 389 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 TAF1DQ9H5J8 278 aaPredicted RBP15.92■□□□□ 0.14
SF1-211ENST00000448404 EFCC1Q9HA90 598 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 BCCIPQ9P287 314 aaKnown RBP eCLIP15.92■□□□□ 0.14
SF1-211ENST00000448404 TRPC6Q9Y210 931 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 DCDC2CA8MYV0 355 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 UBA1P22314 1058 aaKnown RBP15.92■□□□□ 0.14
SF1-211ENST00000448404 GLRA2P23416 452 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 GJC1P36383 396 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 ZNF394Q53GI3 561 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 IQCKQ8N0W5 287 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 OR5B17Q8NGF7 314 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 UBLCP1Q8WVY7 318 aaPredicted RBP15.92■□□□□ 0.14
SF1-211ENST00000448404 SHC3Q92529 594 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 ATP6V0A4Q9HBG4 840 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 RNF14Q9UBS8 474 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 ADAMTS5Q9UNA0 930 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 SPATA31C2B4DYI2 1134 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 ZEB2O60315 1214 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 ARIH2O95376 493 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 HSD17B3P37058 310 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 GUCY1A3Q02108 690 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 TDRD10Q5VZ19 366 aaKnown RBP15.92■□□□□ 0.14
SF1-211ENST00000448404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.92■□□□□ 0.144e-7■■□□□ 12.4
SF1-211ENST00000448404 NT5C1BQ96P26 610 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 TXNRD2Q9NNW7 524 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 PDLIM7Q9NR12 457 aa15.92■□□□□ 0.14
SF1-211ENST00000448404 RGPD3A6NKT7 1758 aaPredicted RBP15.91■□□□□ 0.14
SF1-211ENST00000448404 RGPD4Q7Z3J3 1758 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 SYNGAP1Q96PV0 1343 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 A0A0A6YYK5 440 aaPredicted RBP15.91■□□□□ 0.14
SF1-211ENST00000448404 SOWAHBA6NEL2 793 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 SMIM23A6NLE4 172 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 SUPT20HL2P0C7V6 817 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 SRGAP2CP0DJJ0 459 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 SNX1Q13596 522 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 SUPT20HL1Q3ZLR7 823 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 TTC27Q6P3X3 843 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 GPD1LQ8N335 351 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 LMBR1Q8WVP7 490 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 CAVIN3Q969G5 261 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 HERPUD2Q9BSE4 406 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 ZNF302Q9NR11 478 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 GPC5P78333 572 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 GLE1Q53GS7 698 aaKnown RBP15.91■□□□□ 0.14
SF1-211ENST00000448404 LEKR1Q6ZMV7 388 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 C12orf56Q8IXR9 622 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 SYCE1Q8N0S2 351 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 ZNF564Q8TBZ8 553 aaPredicted RBP15.91■□□□□ 0.14
SF1-211ENST00000448404 ISCUQ9H1K1 167 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 APOBEC3GQ9HC16 384 aaKnown RBP15.91■□□□□ 0.14
SF1-211ENST00000448404 TMEM8AQ9HCN3 771 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 KLHL11Q9NVR0 708 aa15.91■□□□□ 0.14
SF1-211ENST00000448404 CWC15Q9P013 229 aaKnown RBP15.91■□□□□ 0.14
SF1-211ENST00000448404 RRP15Q9Y3B9 282 aaKnown RBP15.91■□□□□ 0.14
SF1-211ENST00000448404 SPOPO43791 374 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 GRIN3BO60391 1043 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 DGAT1O75907 488 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 DHX9Q08211 1270 aaKnown RBP15.9■□□□□ 0.14
SF1-211ENST00000448404 Q3C1V9 767 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 CRELD2Q6UXH1 353 aaPredicted RBP15.9■□□□□ 0.14
SF1-211ENST00000448404 SRLQ86TD4 932 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 RASGEF1CQ8N431 466 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 ATG4AQ8WYN0 398 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 DDX1Q92499 740 aaKnown RBP15.9■□□□□ 0.14
SF1-211ENST00000448404 KIFAP3Q92845 792 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 SGIP1Q9BQI5 828 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 DNAJC17Q9NVM6 304 aaKnown RBP15.9■□□□□ 0.14
SF1-211ENST00000448404 ATP8A1Q9Y2Q0 1164 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 CD2APQ9Y5K6 639 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 MFAP3P55082 362 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 GNGT1P63211 74 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 MKRN3Q13064 507 aaKnown RBP15.9■□□□□ 0.14
SF1-211ENST00000448404 STXBP2Q15833 593 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 HSDL1Q3SXM5 330 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 PRUNE1Q86TP1 453 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 IFT74Q96LB3 600 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 SH3GL2Q99962 352 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 ST6GALNAC4Q9H4F1 302 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 ARHGAP28Q9P2N2 729 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 EXOC7Q9UPT5 735 aa15.9■□□□□ 0.14
SF1-211ENST00000448404 GSTTP1A0A1W2PQM5 241 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 VNN1O95497 513 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 HLA-DRAP01903 254 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 RRM1P23921 792 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 GTF2A1P52655 376 aaPredicted RBP15.89■□□□□ 0.13
SF1-211ENST00000448404 PLTPP55058 493 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 TRIP13Q15645 432 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms