RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 TADA2AO75478 443 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 ZBED1O96006 694 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SLC18A3Q16572 532 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 RBM43Q6ZSC3 357 aaKnown RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 VSIG10LQ86VR7 867 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 CBWD2Q8IUF1 395 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 GSDMBQ8TAX9 411 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SCFD1Q8WVM8 642 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 MTMR9Q96QG7 549 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SEMA6BQ9H3T3 888 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 CRCPO75575 148 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SRGAP2BP0DMP2 458 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 OAS2P29728 719 aaKnown RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 DR1Q01658 176 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 TTI2Q6NXR4 508 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SH3BP5LQ7L8J4 393 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 ARRDC4Q8NCT1 418 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 TAF1DQ9H5J8 278 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SSU72P8A0A1W2PR75 194 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 KLRG2A4D1S0 409 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 FOXP2O15409 715 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 PDGFRBP09619 1106 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 CASP4P49662 377 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 FKBP1BP68106 108 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 ACVR2BQ13705 512 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SETDB1Q15047 1291 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 DCAF4L1Q3SXM0 396 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 TMEM119Q4V9L6 283 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 CCDC121Q6ZUS5 278 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 BZW1Q7L1Q6 419 aaKnown RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 RYBPQ8N488 228 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SLC30A5Q8TAD4 765 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 PURBQ96QR8 312 aaKnown RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 ERGIC2Q96RQ1 377 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SETD4Q9NVD3 440 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 PARVAQ9NVD7 372 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 CCDC188H7C350 402 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 TRPA1O75762 1119 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 GYPCP04921 128 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 WEE2P0C1S8 567 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 SLC7A5Q01650 507 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 TFDP2Q14188 446 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 KLHDC7AQ5VTJ3 777 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 RGMBQ6NW40 437 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 ANKRD42Q8N9B4 389 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 DNAAF3Q8N9W5 541 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 CCHCR1Q8TD31 782 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 ZNF384Q8TF68 577 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 RNF25Q96BH1 459 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 ASTN2O75129 1339 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-213ENST00000448038 RGPD1P0DJD0 1748 aa7.89□□□□□ -1.15
SYNE1-213ENST00000448038 A0A087X0B3 334 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 TMEM150BA6NC51 233 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 GIPC1O14908 333 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 NCK2O43639 380 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 KPNA6O60684 536 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 TOM1L1O75674 476 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 LCP1P13796 627 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 ADCYAP1R1P41586 468 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 EPHB4P54760 987 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 CCDC13Q8IYE1 715 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 ELMOD1Q8N336 334 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 TC2NQ8N9U0 490 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 FBF1Q8TES7 1133 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 CCT6BQ92526 530 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 C18orf8Q96DM3 657 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 KIF9Q9HAQ2 790 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 OLFML3Q9NRN5 406 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 A0A087WZ62 844 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 AKR1A1P14550 325 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 LAMTOR4Q0VGL1 99 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-213ENST00000448038 FYB2Q5VWT5 728 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 CENPPQ6IPU0 288 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 FAM117BQ6P1L5 589 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 REPS2Q8NFH8 660 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 MGARPQ8TDB4 240 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 CPA5Q8WXQ8 436 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 CDKL2Q92772 493 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 FDXACB1Q9BRP7 624 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-213ENST00000448038 NIF3L1Q9GZT8 377 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 KLK14Q9P0G3 267 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
SYNE1-213ENST00000448038 A6NNZ2 444 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 PLA2G6O60733 806 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 ITGB3P05106 788 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 GARTP22102 1010 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 ZNF280AP59817 542 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-213ENST00000448038 FUT2Q10981 343 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 STILQ15468 1287 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 TUBB8Q3ZCM7 444 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 TREML2Q5T2D2 321 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 TLK2Q86UE8 772 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 HPDLQ96IR7 371 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 SMC6Q96SB8 1091 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 PACSIN2Q9UNF0 486 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-213ENST00000448038 ATP8A1Q9Y2Q0 1164 aa7.88□□□□□ -1.15
SYNE1-213ENST00000448038 POC1B-GALNT4F8VUJ3 575 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms