RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SCRN1Q12765 414 aa27.03■■□□□ 1.92
PMS1-214ENST00000446877 LIN9Q5TKA1 542 aa27.03■■□□□ 1.92
PMS1-214ENST00000446877 GRASPQ7Z6J2 395 aaPredicted RBP27.03■■□□□ 1.92
PMS1-214ENST00000446877 CDR2LQ86X02 465 aaPredicted RBP27.03■■□□□ 1.92
PMS1-214ENST00000446877 ST13P5Q8NFI4 369 aaPredicted RBP27.03■■□□□ 1.92
PMS1-214ENST00000446877 HSD17B14Q9BPX1 270 aa27.03■■□□□ 1.92
PMS1-214ENST00000446877 STK36Q9NRP7 1315 aa27.03■■□□□ 1.92
PMS1-214ENST00000446877 GJB4Q9NTQ9 266 aa27.03■■□□□ 1.92
PMS1-214ENST00000446877 ZMYM2Q9UBW7 1377 aa27.02■■□□□ 1.92
PMS1-214ENST00000446877 SP9P0CG40 484 aa27.02■■□□□ 1.92
PMS1-214ENST00000446877 GLRA2P23416 452 aa27.02■■□□□ 1.92
PMS1-214ENST00000446877 PRSS55Q6UWB4 352 aaPredicted RBP27.02■■□□□ 1.92
PMS1-214ENST00000446877 KIAA2013Q8IYS2 634 aa27.02■■□□□ 1.92
PMS1-214ENST00000446877 BRMS1Q9HCU9 246 aa27.02■■□□□ 1.92
PMS1-214ENST00000446877 CDH7Q9ULB5 785 aa27.02■■□□□ 1.92
PMS1-214ENST00000446877 CALCRLQ16602 461 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 RTP2Q5QGT7 225 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 POTEGQ6S5H5 508 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 CEP57Q86XR8 500 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 WASF1Q92558 559 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 TTPALQ9BTX7 342 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 POLR3FQ9H1D9 316 aaPredicted RBP27.01■■□□□ 1.91
PMS1-214ENST00000446877 DLGAP2Q9P1A6 1054 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 FRYLO94915 3013 aa27.01■■□□□ 1.91
PMS1-214ENST00000446877 HNRNPA1P09651 372 aaKnown RBP eCLIP27■■□□□ 1.91
PMS1-214ENST00000446877 TUSC3Q13454 348 aa27■■□□□ 1.91
PMS1-214ENST00000446877 EARS2Q5JPH6 523 aaKnown RBP27■■□□□ 1.91
PMS1-214ENST00000446877 PPM1LQ5SGD2 360 aa27■■□□□ 1.91
PMS1-214ENST00000446877 FAM171A1Q5VUB5 890 aa27■■□□□ 1.91
PMS1-214ENST00000446877 PJA1Q8NG27 643 aa27■■□□□ 1.91
PMS1-214ENST00000446877 FOXQ1Q9C009 403 aa27■■□□□ 1.91
PMS1-214ENST00000446877 FBXW11Q9UKB1 542 aa27■■□□□ 1.91
PMS1-214ENST00000446877 LRRIQ4A6NIV6 560 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 XYLBO75191 536 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 KRT2P35908 639 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 RARRES1P49788 294 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 STARD6P59095 220 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 GPC5P78333 572 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 TMEM132AQ24JP5 1023 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 PARM1Q6UWI2 310 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 MTSS1LQ765P7 747 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 HASPINQ8TF76 798 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 RUBCNQ92622 972 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 RMDN1Q96DB5 314 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 PAAF1Q9BRP4 392 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 RPP25Q9BUL9 199 aaKnown RBP26.99■■□□□ 1.91
PMS1-214ENST00000446877 TTC12Q9H892 705 aaPredicted RBP26.99■■□□□ 1.91
PMS1-214ENST00000446877 PRMT7Q9NVM4 692 aaPredicted RBP26.99■■□□□ 1.91
PMS1-214ENST00000446877 ORC3Q9UBD5 711 aaPredicted RBP26.99■■□□□ 1.91
PMS1-214ENST00000446877 CACNG4Q9UBN1 327 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 POLIQ9UNA4 740 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 CACNA1AO00555 2505 aa26.99■■□□□ 1.91
PMS1-214ENST00000446877 CASTOR2A6NHX0 329 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 C8AP07357 584 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 XRCC6P12956 609 aaKnown RBP eCLIP26.98■■□□□ 1.91
PMS1-214ENST00000446877 NR5A1Q13285 461 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 PSMD5Q16401 504 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 PDXDC1Q6P996 788 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 DGLUCYQ7Z3D6 616 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 ZBTB8OSQ8IWT0 167 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 PIGOQ8TEQ8 1089 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 PIK3R5Q8WYR1 880 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 FGF14Q92915 247 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 PRIMPOLQ96LW4 560 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 CLSTN3Q9BQT9 956 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 DMXL1Q9Y485 3027 aa26.98■■□□□ 1.91
PMS1-214ENST00000446877 FAM205CA6NFA0 338 aa26.97■■□□□ 1.91
PMS1-214ENST00000446877 USO1O60763 962 aaKnown RBP26.97■■□□□ 1.91
PMS1-214ENST00000446877 PFKFB2O60825 505 aa26.97■■□□□ 1.91
PMS1-214ENST00000446877 TXKP42681 527 aa26.97■■□□□ 1.91
PMS1-214ENST00000446877 NTHL1P78549 312 aa26.97■■□□□ 1.91
PMS1-214ENST00000446877 ELAVL2Q12926 359 aaKnown RBP26.97■■□□□ 1.91
PMS1-214ENST00000446877 SNW1Q13573 536 aaKnown RBP26.97■■□□□ 1.91
PMS1-214ENST00000446877 MAEAQ7L5Y9 396 aa26.97■■□□□ 1.91
PMS1-214ENST00000446877 LNX1Q8TBB1 728 aaPredicted RBP26.97■■□□□ 1.91
PMS1-214ENST00000446877 FGF13Q92913 245 aa26.97■■□□□ 1.91
PMS1-214ENST00000446877 BCO2Q9BYV7 579 aa26.97■■□□□ 1.91
PMS1-214ENST00000446877 CCL16O15467 120 aa26.96■■□□□ 1.91
PMS1-214ENST00000446877 THP07101 528 aa26.96■■□□□ 1.91
PMS1-214ENST00000446877 PPP4R3CPQ6ZMV5 832 aa26.96■■□□□ 1.91
PMS1-214ENST00000446877 A0A087WWV3 80 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 KANSL1LA0AUZ9 987 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 N4BP3O15049 544 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 DTNBO60941 627 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 KIF4AO95239 1232 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 GLULP15104 373 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 HOXA9P31269 272 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 PRKCQQ04759 706 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 PUM1Q14671 1186 aaKnown RBP eCLIP26.95■■□□□ 1.9
PMS1-214ENST00000446877 MCPH1Q8NEM0 835 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 GPRC5CQ9NQ84 441 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 SPATA6Q9NWH7 488 aaPredicted RBP26.95■■□□□ 1.9
PMS1-214ENST00000446877 SNTG2Q9NY99 539 aa26.95■■□□□ 1.9
PMS1-214ENST00000446877 NEMFO60524 1076 aa26.94■■□□□ 1.9
PMS1-214ENST00000446877 KINO60870 393 aaKnown RBP26.94■■□□□ 1.9
PMS1-214ENST00000446877 PFKPQ01813 784 aa26.94■■□□□ 1.9
PMS1-214ENST00000446877 MLF2Q15773 248 aaPredicted RBP26.94■■□□□ 1.9
PMS1-214ENST00000446877 SLC44A4Q53GD3 710 aa26.94■■□□□ 1.9
PMS1-214ENST00000446877 C2orf40Q9H1Z8 148 aa26.94■■□□□ 1.9
PMS1-214ENST00000446877 FZD8Q9H461 694 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 272.3 ms