RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 SMARCD2Q92925 531 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 ASB16Q96NS5 453 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 ARPP21Q9UBL0 812 aaPredicted RBP7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 RPS6KA5O75582 802 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 FGFR1P11362 822 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 RPS6P62753 249 aaKnown RBP7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 CACNB1Q02641 598 aaPredicted RBP7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 ZNF484Q5JVG2 852 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 CLLU1OSQ5K130 101 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 PPM1LQ5SGD2 360 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 GIMAP6Q6P9H5 292 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 GRASPQ7Z6J2 395 aaPredicted RBP7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 CSRNP2Q9H175 543 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 EPN3Q9H201 632 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 CHST7Q9NS84 486 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 LRRK1Q38SD2 2015 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 COL1A2P08123 1366 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 KALRNO60229 2985 aa7.41□□□□□ -1.22
BRAFP1-201ENST00000445336 WIPF1O43516 503 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 RFPL2O75678 378 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 AGFG2O95081 481 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 ATXN1LP0C7T5 689 aaKnown RBP7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 GDI1P31150 447 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 GBP1P32455 592 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 KRT76Q01546 638 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 PPFIA1Q13136 1202 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 MTX1Q13505 466 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 RALBP1Q15311 655 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 GRIK4Q16099 956 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 KIZQ2M2Z5 673 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 LIN9Q5TKA1 542 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 FBXL19Q6PCT2 694 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 VITQ6UXI7 678 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 DNAJB3Q8WWF6 145 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 CPNE5Q9HCH3 593 aa7.4□□□□□ -1.22
BRAFP1-201ENST00000445336 A0A0U1RQF3 1178 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 DFNA5O60443 496 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 KPNA1P52294 538 aaPredicted RBP7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 CRYBB1P53674 252 aaPredicted RBP7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 PABPC1LQ4VXU2 614 aaKnown RBP7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 SEPT14Q6ZU15 432 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 MED13LQ71F56 2210 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 TMEM209Q96SK2 561 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 GTPBP2Q9BX10 602 aaKnown RBP7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 USP44Q9H0E7 712 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 CHST12Q9NRB3 414 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 HCSTQ9UBK5 93 aa7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 USP9YO00507 2555 aaPredicted RBP7.4□□□□□ -1.23
BRAFP1-201ENST00000445336 NFASCO94856 1347 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 WDR27A2RRH5 827 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 PCDHGA12O60330 932 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 CAPN3P20807 821 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 SLC6A4P31645 630 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 CLEC10AQ8IUN9 316 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 ARID3BQ8IVW6 561 aaPredicted RBP7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 MMS19Q96T76 1030 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 ZMYM5Q9UJ78 669 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 MYH7P12883 1935 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 F8P00451 2351 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 CACNA1DQ01668 2161 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 TGM5O43548 720 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 GGPS1O95749 300 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 JUPP14923 745 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 FOSL1P15407 271 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 ITGB5P18084 799 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 ITGA3P26006 1051 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 GRK6P43250 576 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 RAB27AP51159 221 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 PRSS36Q5K4E3 855 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 HIST2H2BCQ6DN03 193 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 CAPRIN2Q6IMN6 1127 aaKnown RBP7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 AUTS2Q8WXX7 1259 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 CAMK1GQ96NX5 476 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 MTMR4Q9NYA4 1195 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 DACT1Q9NYF0 836 aa7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 SMG1Q96Q15 3661 aaKnown RBP7.39□□□□□ -1.23
BRAFP1-201ENST00000445336 CNTNAP2Q9UHC6 1331 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 ANO9A1A5B4 782 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 GNSP15586 552 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 ZXDCQ2QGD7 858 aaPredicted RBP7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 HSDL1Q3SXM5 330 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 DCBLD1Q8N8Z6 715 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 ITFG1Q8TB96 612 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 SENP7Q9BQF6 1050 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 NRDE2Q9H7Z3 1164 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 C2orf42Q9NWW7 574 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 MRPS23Q9Y3D9 190 aaKnown RBP7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 NFIBO00712 420 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 RFPL3O75679 317 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 CFIP05156 583 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 CALML3P27482 149 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 SLC1A4P43007 532 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 SEMG2Q02383 582 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 DMC1Q14565 340 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 WDR43Q15061 677 aaKnown RBP eCLIP7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 MARCH8Q5T0T0 291 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 TSTD1Q8NFU3 115 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 USP33Q8TEY7 942 aa7.38□□□□□ -1.23
BRAFP1-201ENST00000445336 NIFKQ9BYG3 293 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms