RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 AOC3Q16853 763 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 DCAF12L1Q5VU92 463 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 TTC27Q6P3X3 843 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 NOP9Q86U38 636 aaKnown RBP12.42□□□□□ -0.42
HCFC1-203ENST00000444191 FMNL3Q8IVF7 1028 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 DTX3LQ8TDB6 740 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 C10orf88Q9H8K7 445 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 ZWILCHQ9H900 591 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
HCFC1-203ENST00000444191 HAO1Q9UJM8 370 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 SLC16A3O15427 465 aaKnown RBP12.42□□□□□ -0.42
HCFC1-203ENST00000444191 ALDH5A1P51649 535 aaPredicted RBP12.42□□□□□ -0.42
HCFC1-203ENST00000444191 DRP2Q13474 957 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 P3H1Q32P28 736 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 GNPTABQ3T906 1256 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 CROCCP2Q86T23 111 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 CCDC89Q8N998 374 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 AGAP11Q8TF27 550 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.42□□□□□ -0.42
HCFC1-203ENST00000444191 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.421e-6■■■□□ 15.2
HCFC1-203ENST00000444191 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.42□□□□□ -0.42
HCFC1-203ENST00000444191 ADAM22Q9P0K1 906 aa12.42□□□□□ -0.42
HCFC1-203ENST00000444191 SEPT9Q9UHD8 586 aaPredicted RBP12.42□□□□□ -0.42
HCFC1-203ENST00000444191 BAG2O95816 211 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 KRT1P04264 644 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 GBP1P32455 592 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 MTERF2Q49AM1 385 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 MDH1BQ5I0G3 518 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 BSPRYQ5W0U4 402 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 PPP1R21Q6ZMI0 780 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 CICQ96RK0 1608 aaPredicted RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 CHD4Q14839 1912 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 HSPA6P17066 643 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 RRM1P23921 792 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 RAD23BP54727 409 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 NOP14P78316 857 aaKnown RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 DLGAP5Q15398 846 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 SNRNP35Q16560 246 aaKnown RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 BRDTQ58F21 947 aaPredicted RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 ANKRD20A3Q5VUR7 823 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 DUPD1Q68J44 220 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 SPOPLQ6IQ16 392 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 ANKRD35Q8N283 1001 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 DNAJC18Q9H819 358 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 RAB20Q9NX57 234 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 F5H423 210 aaPredicted RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 EDIL3O43854 480 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 PRKCIP41743 596 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 PSMC4P43686 418 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 STRN3Q13033 797 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 AUHQ13825 339 aaKnown RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 FYB2Q5VWT5 728 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 NLRX1Q86UT6 975 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 STMN2Q93045 179 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 LRRC37BQ96QE4 947 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 WNT8AQ9H1J5 351 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 NPHS2Q9NP85 383 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 SIX2Q9NPC8 291 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 EXOC7Q9UPT5 735 aa12.41□□□□□ -0.42
HCFC1-203ENST00000444191 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
HCFC1-203ENST00000444191 CFAP69A5D8W1 941 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 MMP10P09238 476 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 ZSCAN5DPP0CG00 497 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 ECHS1P30084 290 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 BASP1P80723 227 aaKnown RBP12.4□□□□□ -0.42
HCFC1-203ENST00000444191 ZNF572Q7Z3I7 529 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-203ENST00000444191 ZBTB33Q86T24 672 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 EXOC3L1Q86VI1 746 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.4□□□□□ -0.42
HCFC1-203ENST00000444191 ETNPPLQ8TBG4 499 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 SPOCK2Q92563 424 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 TTC17Q96AE7 1141 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 MIEF2Q96C03 454 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 SNF8Q96H20 258 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 KIF9Q9HAQ2 790 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 SPATA31A5Q5VU36 1347 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 SPATA31A7Q8IWB4 1347 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 NQO1P15559 274 aaKnown RBP12.4□□□□□ -0.42
HCFC1-203ENST00000444191 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
HCFC1-203ENST00000444191 ARHGEF16Q5VV41 709 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 LONP2Q86WA8 852 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 GRK7Q8WTQ7 553 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 GINM1Q9NU53 330 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 PCSK1NQ9UHG2 260 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 NUP98P52948 1817 aa12.4□□□□□ -0.42
HCFC1-203ENST00000444191 H0YGN5 161 aa12.39□□□□□ -0.43
HCFC1-203ENST00000444191 PIK3R2O00459 728 aa12.39□□□□□ -0.43
HCFC1-203ENST00000444191 SREBF1P36956 1147 aa12.39□□□□□ -0.43
HCFC1-203ENST00000444191 MTMR1Q13613 665 aa12.39□□□□□ -0.43
HCFC1-203ENST00000444191 KRT39Q6A163 491 aa12.39□□□□□ -0.43
HCFC1-203ENST00000444191 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
HCFC1-203ENST00000444191 OTOP1Q7RTM1 612 aa12.39□□□□□ -0.43
HCFC1-203ENST00000444191 PCDHB18PQ96TA0 734 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms