RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 CRKLP46109 303 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 QARSP47897 775 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 ICE2Q659A1 982 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 ST13P5Q8NFI4 369 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 NSUN6Q8TEA1 469 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 DIS3LQ8TF46 1054 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 MICAL3Q7RTP6 2002 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 EVPLLA8MZ36 301 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 H0Y3Z8 333 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 MYL3P08590 195 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 ST8SIA6P61647 398 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 CCDC137Q6PK04 289 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 TTC30AQ86WT1 665 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 CLEC4FQ8N1N0 589 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 ETNK1Q9HBU6 452 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 NFKBIL1Q9UBC1 381 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 DCTN4Q9UJW0 460 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 LSM7Q9UK45 103 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 SLC4A7Q9Y6M7 1214 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 SESN1Q9Y6P5 492 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 PSMA4P25789 261 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 SFSWAPQ12872 951 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 DAB2IPQ5VWQ8 1189 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 ZNF772Q68DY9 489 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 CC2D1AQ6P1N0 951 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 APLFQ8IW19 511 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 FAM9CQ8IZT9 166 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 RIBC1Q8N443 379 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 TTLL11Q8NHH1 800 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 RASGRP4Q8TDF6 673 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 MRFAP1Q9Y605 127 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 PTPRTO14522 1441 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 C3orf70A6NLC5 250 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 MTSS1O43312 755 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 CYP21A2P08686 494 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 ATXN8OSP0DMR3 200 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 PGM1P36871 562 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 ST13P50502 369 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 KLC1Q07866 573 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 FOXD4Q12950 439 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 PDAP1Q13442 181 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 DALRD3Q5D0E6 543 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 MFSD14CQ5VZR4 134 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 MED15Q96RN5 788 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 FAM49AQ9H0Q0 323 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 ADNPQ9H2P0 1102 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 PAPOLBQ9NRJ5 636 aaKnown RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.04□□□□□ -1.28
USP46-201ENST00000441222 ATP7BP35670 1465 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 SYNDIG1LA6NDD5 238 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 MAFGO15525 162 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 UBXN2AP68543 259 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 LLGL1Q15334 1064 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 BTBD8Q5XKL5 378 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 CIAPIN1Q6FI81 312 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 FRMD5Q7Z6J6 570 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 RNF135Q8IUD6 432 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 KRT78Q8N1N4 520 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 EPS8L2Q9H6S3 715 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 TUBGCP4Q9UGJ1 667 aa7.04□□□□□ -1.28
USP46-201ENST00000441222 ANKARQ7Z5J8 1434 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 RGS2P41220 211 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 RAD23BP54727 409 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 PIGHQ14442 188 aaPredicted RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 CAPRIN2Q6IMN6 1127 aaKnown RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 FAM47EQ6ZV65 393 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 TAS2R42Q7RTR8 314 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 PARP9Q8IXQ6 854 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 RCOR2Q8IZ40 523 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 ATL2Q8NHH9 583 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 PRPF18Q99633 342 aaKnown RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 OSBPL10Q9BXB5 764 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 PCDHA6Q9UN73 950 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 SNX24Q9Y343 169 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 PCDHA8Q9Y5H6 950 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 ADCY3O60266 1144 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 RTN2O75298 545 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 NDUFS3O75489 264 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 VCAM1P19320 739 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 EIF2AK2P19525 551 aaKnown RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 ADORA1P30542 326 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 ARL4DP49703 201 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 ASCC2Q9H1I8 757 aaPredicted RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 ARL2BPQ9Y2Y0 163 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 PRG3Q9Y2Y8 225 aaPredicted RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 ZC3H4Q9UPT8 1303 aaKnown RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 ANKRD12Q6UB98 2062 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 KDM5CP41229 1560 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 CFAP99D6REC4 459 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 KRT14P02533 472 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 FTLP02792 175 aaPredicted RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 SCP2P22307 547 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 SLC16A2P36021 539 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 CLK1P49759 484 aaKnown RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 PDIA2Q13087 525 aaKnown RBP7.03□□□□□ -1.28
USP46-201ENST00000441222 CUL3Q13618 768 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 CYTH1Q15438 398 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 PHKG1Q16816 387 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 CEP78Q5JTW2 689 aa7.03□□□□□ -1.28
USP46-201ENST00000441222 FAM102AQ5T9C2 384 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms