RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 RSPH3Q86UC2 560 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 TMEM192Q8IY95 271 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 GPD1LQ8N335 351 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 NME8Q8N427 588 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 SLC35C1Q96A29 364 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 CCDC127Q96BQ5 260 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 ARID3AQ99856 593 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 MKNK1Q9BUB5 465 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 PIN4Q9Y237 131 aaKnown RBP10.88□□□□□ -0.67
CBX5-202ENST00000439541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.88□□□□□ -0.67
CBX5-202ENST00000439541 LRRC10BA6NIK2 292 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 GHRP10912 638 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 HOXA11P31270 313 aaPredicted RBP10.88□□□□□ -0.67
CBX5-202ENST00000439541 CDK7P50613 346 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 CBX1P83916 185 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 UBXN1Q04323 297 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 MCL1Q07820 350 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 BFSP1Q12934 665 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 MYBPC2Q14324 1141 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 C1orf220Q5T0J3 134 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 LMBRD2Q68DH5 695 aaPredicted RBP10.88□□□□□ -0.67
CBX5-202ENST00000439541 THNSL1Q8IYQ7 743 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 FBXL18Q96ME1 805 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 EIF2AQ9BY44 585 aaKnown RBP10.88□□□□□ -0.67
CBX5-202ENST00000439541 NDST4Q9H3R1 872 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 AGO3Q9H9G7 860 aaKnown RBP10.88□□□□□ -0.67
CBX5-202ENST00000439541 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 TNFSF13BQ9Y275 285 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 PTPRJQ12913 1337 aa10.88□□□□□ -0.67
CBX5-202ENST00000439541 EXTL3O43909 919 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 NPTXRO95502 500 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 COL6A1P12109 1028 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 CKBP12277 381 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 PBX1P40424 430 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 APBA1Q02410 837 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 CYP24A1Q07973 514 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 MBTPS1Q14703 1052 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 FILIP1LQ4L180 1135 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 SLFN12LQ6IEE8 588 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 TRAF7Q6Q0C0 670 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 RPAINQ86UA6 219 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 VSTM4Q8IW00 320 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 TMEM174Q8WUU8 243 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 POP1Q99575 1024 aaKnown RBP10.87□□□□□ -0.67
CBX5-202ENST00000439541 CRACR2AQ9BSW2 395 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 RBAKQ9NYW8 714 aaPredicted RBP10.87□□□□□ -0.67
CBX5-202ENST00000439541 UMODL1Q5DID0 1318 aa10.87□□□□□ -0.67
CBX5-202ENST00000439541 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 LRRIQ3A6PVS8 624 aaPredicted RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 MEFVO15553 781 aaPredicted RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 SLU7O95391 586 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 CXCL8P10145 99 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 DLATP10515 647 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 CD52P31358 61 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 VAMP7P51809 220 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 CDC42EP1Q00587 391 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 PPP3CAQ08209 521 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 KCNH2Q12809 1159 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 NFX1Q12986 1120 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 LPIN1Q14693 890 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 ARID5BQ14865 1188 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 CBWD6Q4V339 395 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 CBWD3Q5JTY5 395 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 FBXO47Q5MNV8 452 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 CBWD5Q5RIA9 395 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 SLC39A5Q6ZMH5 540 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 TMEM130Q8N3G9 435 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 ZNF397Q8NF99 534 aaPredicted RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 PAWRQ96IZ0 340 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 METTL14Q9HCE5 456 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 PDE11AQ9HCR9 933 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 PRDM10Q9NQV6 1147 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 ST3GAL5Q9UNP4 418 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 HES2Q9Y543 173 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 EPHB6O15197 1021 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 OGTO15294 1046 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 RPS6KA5O75582 802 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 CD4P01730 458 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 AFPP02771 609 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 KRT13P13646 458 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 GCLMP48507 274 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 ENOX2Q16206 610 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 INTS8Q75QN2 995 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 MFSD14AQ96MC6 490 aa10.86□□□□□ -0.67
CBX5-202ENST00000439541 NXF3Q9H4D5 531 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 CPSF3Q9UKF6 684 aaKnown RBP10.86□□□□□ -0.67
CBX5-202ENST00000439541 ZNF233A6NK53 670 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 LRRN2O75325 713 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 MCF2P10911 925 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
CBX5-202ENST00000439541 MYL7Q01449 175 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 TLE2Q04725 743 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 LRRC26Q2I0M4 334 aa10.85□□□□□ -0.67
CBX5-202ENST00000439541 UBXN11Q5T124 520 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms