RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TMEM87AQ8NBN3 555 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 COLEC11Q9BWP8 271 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 CDT1Q9H211 546 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 ZHX3Q9H4I2 956 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 GDAQ9Y2T3 454 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 IRAK3Q9Y616 596 aa27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 TDRD15B5MCY1 1934 aaKnown RBP27.13■■□□□ 1.93
RAPGEF1-206ENST00000438647 GRXCR2A6NFK2 248 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 C2orf71A6NGG8 1288 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 TOM1L1O75674 476 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 THP07101 528 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 MCF2P10911 925 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 STAT6P42226 847 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 YARSP54577 528 aaKnown RBP27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 DLX2Q07687 328 aaPredicted RBP27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 MPZL3Q6UWV2 235 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 ZPBP2Q6X784 338 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 HAUS6Q7Z4H7 955 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 KCNG4Q8TDN1 519 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 CCDC94Q9BW85 323 aaPredicted RBP27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 TOPORSQ9NS56 1045 aaPredicted RBP27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 CD207Q9UJ71 328 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 CFAP45Q9UL16 551 aa27.12■■□□□ 1.93
RAPGEF1-206ENST00000438647 TCF20Q9UGU0 1960 aaKnown RBP27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 K7ENM7 598 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 TRAK2O60296 914 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 PROZP22891 400 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 GRM5P41594 1212 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 TUSC3Q13454 348 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 PKP1Q13835 747 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 FAM178BQ8IXR5 827 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 MARCH5Q9NX47 278 aa27.11■■□□□ 1.93
RAPGEF1-206ENST00000438647 CUTAO60888 179 aa27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 BRD1O95696 1058 aa27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 GLP2RO95838 553 aa27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 FOXD4L6Q3SYB3 417 aaPredicted RBP27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 FOXD4L3Q6VB84 417 aaPredicted RBP27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 BICD1Q96G01 975 aa27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 SSX2IPQ9Y2D8 614 aa27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 MUC3AQ02505 3323 aa27.1■■□□□ 1.93
RAPGEF1-206ENST00000438647 PTGESO14684 152 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 SOD2P04179 222 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 SMAD4Q13485 552 aaKnown RBP27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 BECN1Q14457 450 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 NOLC1Q14978 699 aaKnown RBP eCLIP27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 CLUL1Q15846 466 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 TMEM184AQ6ZMB5 413 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 ZBTB33Q86T24 672 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 MSLNLQ96KJ4 702 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 VN1R3Q9BXE9 311 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 CLEC1BQ9P126 229 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 ANKFY1Q9P2R3 1169 aa27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 BARX2Q9UMQ3 279 aaPredicted RBP27.09■■□□□ 1.93
RAPGEF1-206ENST00000438647 NCOR1O75376 2440 aa27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 TNFRSF10AO00220 468 aa27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 CLDN3O15551 220 aa27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 COASYQ13057 564 aa27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 DDX12PQ92771 950 aa27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 PANK2Q9BZ23 570 aa27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 MRPL17Q9NRX2 175 aaKnown RBP27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 TBX20Q9UMR3 447 aa27.08■■□□□ 1.93
RAPGEF1-206ENST00000438647 ABLIM1O14639 778 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 HNRNPDLO14979 420 aaKnown RBP27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 URODP06132 367 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 IL9P15248 144 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 KCNC3Q14003 757 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 HSP90AA2PQ14568 343 aaPredicted RBP27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 PTPN14Q15678 1187 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 DYMQ7RTS9 669 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 PDILTQ8N807 584 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 CEP120Q8N960 986 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 AUTS2Q8WXX7 1259 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 CASP10Q92851 521 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 ACAP3Q96P50 834 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 NECAB3Q96P71 396 aaPredicted RBP27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 HERC2P3Q9BVR0 1158 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 EMILIN2Q9BXX0 1053 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 SEL1LQ9UBV2 794 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 ADAM28Q9UKQ2 775 aa27.07■■□□□ 1.92
RAPGEF1-206ENST00000438647 MYMKA6NI61 221 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 MBTPS2O43462 519 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 CLASP2O75122 1294 aaKnown RBP27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 HARSP12081 509 aaKnown RBP27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 MATR3P43243 847 aaKnown RBP eCLIP27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 LIG4P49917 911 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 OSTNP61366 133 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 MCL1Q07820 350 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 PPFIBP1Q86W92 1011 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 SMRP1Q8NCR6 262 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 VN1R2Q8NFZ6 395 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 CUEDC2Q9H467 287 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 HCFC2Q9Y5Z7 792 aa27.06■■□□□ 1.92
RAPGEF1-206ENST00000438647 A0A087X0B3 334 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 CASTOR2A6NHX0 329 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 TADA2AO75478 443 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 HOXB8P17481 243 aaPredicted RBP27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 GAP43P17677 238 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 ME1P48163 572 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 GTF2BQ00403 316 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms