RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 STXBP4Q6ZWJ1 553 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 SLC39A11Q8N1S5 342 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 FSIP1Q8NA03 581 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 MICAL1Q8TDZ2 1067 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 MRPS27Q92552 414 aaKnown RBP17.92■□□□□ 0.46
CTSD-205ENST00000438213 PPP2R3CQ969Q6 453 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 TMEM169Q96HH4 297 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 TOPORSQ9NS56 1045 aaPredicted RBP17.92■□□□□ 0.46
CTSD-205ENST00000438213 MIOSQ9NXC5 875 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 TBC1D7Q9P0N9 293 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 ANKFY1Q9P2R3 1169 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 HPSEQ9Y251 543 aa17.92■□□□□ 0.46
CTSD-205ENST00000438213 NT5C1B-RDH14C9J2C7 533 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 GCNT3O95395 438 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 THP07101 528 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 PBX3P40426 434 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 MCL1Q07820 350 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 GRIK3Q13003 919 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 NOLC1Q14978 699 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTSD-205ENST00000438213 SKIV2LQ15477 1246 aaKnown RBP17.91■□□□□ 0.46
CTSD-205ENST00000438213 SLFN12LQ6IEE8 588 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 MAP4K3Q8IVH8 894 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 CCDC34Q96HJ3 373 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 ACCSQ96QU6 501 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 NSUN3Q9H649 340 aaKnown RBP17.91■□□□□ 0.46
CTSD-205ENST00000438213 DNAJB4Q9UDY4 337 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 STK39Q9UEW8 545 aa17.91■□□□□ 0.46
CTSD-205ENST00000438213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.9■□□□□ 0.46
CTSD-205ENST00000438213 PVALEFA0A1B0GWK0 134 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 ABLIM1O14639 778 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 ACTN4O43707 911 aaKnown RBP17.9■□□□□ 0.46
CTSD-205ENST00000438213 HARSP12081 509 aaKnown RBP17.9■□□□□ 0.46
CTSD-205ENST00000438213 SLC11A1P49279 550 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 NDUFA8P51970 172 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 OSTNP61366 133 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 COASYQ13057 564 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 POSTNQ15063 836 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 COLGALT2Q8IYK4 626 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 GSTCDQ8NEC7 633 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 PAGE5Q96GU1 130 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 IGSF21Q96ID5 467 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 COLEC11Q9BWP8 271 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 STRA6Q9BX79 667 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 TLR9Q9NR96 1032 aa17.9■□□□□ 0.46
CTSD-205ENST00000438213 TRANK1O15050 2925 aa17.89■□□□□ 0.46
CTSD-205ENST00000438213 MYO7AQ13402 2215 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 NRP1O14786 923 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 NCK2O43639 380 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 MYL1P05976 194 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 CLTAP09496 248 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 DNAJB1P25685 340 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 OR1G1P47890 313 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 DSC1Q08554 894 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 CAMK1Q14012 370 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 L1TD1Q5T7N2 865 aaKnown RBP17.89■□□□□ 0.45
CTSD-205ENST00000438213 UNC13DQ70J99 1090 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 DDX53Q86TM3 631 aaKnown RBP17.89■□□□□ 0.45
CTSD-205ENST00000438213 SYCP3Q8IZU3 236 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 BLZF1Q9H2G9 400 aa17.89■□□□□ 0.45
CTSD-205ENST00000438213 NGRNQ9NPE2 291 aaKnown RBP17.89■□□□□ 0.45
CTSD-205ENST00000438213 OGTO15294 1046 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 PPP1R37O75864 691 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 ZNF202O95125 648 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 TUSC3Q13454 348 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 KANK3Q6NY19 840 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 TMC7Q7Z402 723 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 CEP120Q8N960 986 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 MSTO1Q9BUK6 570 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 TMEM206Q9H813 350 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 PLEKHA5Q9HAU0 1116 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 CDH23Q9H251 3354 aa17.88■□□□□ 0.45
CTSD-205ENST00000438213 A0A0B4J269 797 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 PTGESO14684 152 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 B4GALT3O60512 393 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 MYBP10242 640 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 ERVFC1P60507 584 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 CUL4BQ13620 913 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 XKR4Q5GH76 650 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 TCEAL5Q5H9L2 206 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 FAM26FQ5R3K3 315 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 ALKAL1Q6UXT8 129 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 VPS52Q8N1B4 723 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 CCDC47Q96A33 483 aaKnown RBP17.87■□□□□ 0.45
CTSD-205ENST00000438213 ENTPD7Q9NQZ7 604 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 SLC38A7Q9NVC3 462 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 COG5Q9UP83 839 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 PRG3Q9Y2Y8 225 aaPredicted RBP17.87■□□□□ 0.45
CTSD-205ENST00000438213 STYXL1Q9Y6J8 313 aa17.87■□□□□ 0.45
CTSD-205ENST00000438213 SMIM28A0A1B0GU29 152 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 ANKRD63C9JTQ0 380 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 CSPG5O95196 566 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 CASP1P29466 404 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 KRBA2Q6ZNG9 492 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 GRAMD1CQ8IYS0 662 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 HLA-CQ95604 372 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 TCF25Q9BQ70 676 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 HAPLN2Q9GZV7 340 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 GOLPH3LQ9H4A5 285 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 RPF1Q9H9Y2 349 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms