RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 MARK3P27448 753 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 GCLCP48506 637 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 SNX30Q5VWJ9 437 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 TRIM74Q86UV6 250 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 TRIM73Q86UV7 250 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 FAM13CQ8NE31 585 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 FAM81AQ8TBF8 368 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 TTC1Q99614 292 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 PLVAPQ9BX97 442 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 TBC1D10AQ9BXI6 508 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 KIAA1683Q9H0B3 1180 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 ZNF277Q9NRM2 450 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 AIPL1Q9NZN9 384 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 N4BP2Q86UW6 1770 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 SOCS7O14512 581 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 KIAA0391O15091 583 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 CALUO43852 315 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 GAS8O95995 478 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 PLA2G4BP0C869 781 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 ATF2P15336 505 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 CYP2J2P51589 502 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 MAP7Q14244 749 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 CTTNQ14247 550 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 UBAP2Q5T6F2 1119 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 DUPD1Q68J44 220 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 KCNK18Q7Z418 384 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 ECHDC2Q86YB7 292 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 C4orf33Q8N1A6 199 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 FAM163AQ96GL9 167 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 UBN1Q9NPG3 1134 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 PICK1Q9NRD5 415 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 BLOC1S4Q9NUP1 217 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 ANAPC5Q9UJX4 755 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 STK24Q9Y6E0 443 aa7.9□□□□□ -1.14
SYNPO2-203ENST00000434046 PLCH1Q4KWH8 1693 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 EXOC1LA0A1B0GW35 172 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 CES2O00748 559 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 LMNAP02545 664 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 ETS2P15036 469 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 PRKG1Q13976 671 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 LRRC36Q1X8D7 754 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 CRY2Q49AN0 593 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 EAPPQ56P03 285 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 C15orf52Q6ZUT6 534 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 CCNJLQ8IV13 435 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 TRIM59Q8IWR1 403 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 MYCT1Q8N699 235 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 RBBP8NLQ8NC74 664 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 SCG3Q8WXD2 468 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 FAM210AQ96ND0 272 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 ALG13Q9NP73 1137 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 LARSQ9P2J5 1176 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 DNAJC12Q9UKB3 198 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 ATF5Q9Y2D1 282 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 ALG6Q9Y672 507 aa7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-203ENST00000434046 POTEB3A0JP26 581 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 A6NHS1 94 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 POTECB2RU33 542 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 DDX3XO00571 662 aaKnown RBP eCLIP7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 CYTH3O43739 400 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 CIB2O75838 187 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 RNF8O76064 485 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 TPBGLP0DKB5 382 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 RARGP13631 454 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 RHBDL3P58872 404 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 MKRN3Q13064 507 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 TMED1Q13445 227 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 SPARCL1Q14515 664 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 DRAP1Q14919 205 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 PPP1R18Q6NYC8 613 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 POTEBQ6S5H4 581 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 POP1Q99575 1024 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 THAP2Q9H0W7 228 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 CARD9Q9H257 536 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 DCLRE1BQ9H816 532 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 TMEM165Q9HC07 324 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 NMRK1Q9NWW6 199 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 CCPG1Q9ULG6 757 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 PHTF1Q9UMS5 762 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 C4BP0C0L5 1744 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 PFASO15067 1338 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 ABCB11O95342 1321 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 SFI1A8K8P3 1242 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 FGRP09769 529 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 ESRRAP11474 423 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 PON1P27169 355 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 SMARCA1P28370 1054 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 GSTT1P30711 240 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 SCNN1BP51168 640 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 POLGP54098 1239 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 ARHGAP4P98171 946 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 KRT17Q04695 432 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 OVGP1Q12889 678 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 CLUL1Q15846 466 aa7.89□□□□□ -1.15
SYNPO2-203ENST00000434046 TAF1BQ53T94 588 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms