RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 CDR2Q01850 454 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 OVGP1Q12889 678 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 LBRQ14739 615 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 GORASP1Q9BQQ3 440 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 HEMGNQ9BXL5 484 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 DCLRE1BQ9H816 532 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 NINJ2Q9NZG7 142 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 SLIT2O94813 1529 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 DCTN3O75935 186 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 ATF2P15336 505 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 CA4P22748 312 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 ADGRF4Q8IZF3 695 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 NEDD1Q8NHV4 660 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 RIOX1Q9H6W3 641 aa12.33□□□□□ -0.44
HMGCS1-202ENST00000433297 E7ENQ6 273 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 CDH16O75309 829 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 VHLP40337 213 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 LRRC23Q53EV4 343 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 SLC51AQ86UW1 340 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 MCUR1Q96AQ8 359 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 APEX2Q9UBZ4 518 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 UBR2Q8IWV8 1755 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 GPR75-ASB3A0A0A6YYF3 556 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 PICALMQ13492 652 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 INTS5Q6P9B9 1019 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 MTHFD1LQ6UB35 978 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 ARHGAP22Q7Z5H3 698 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 PPFIBP2Q8ND30 876 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 STMN2Q93045 179 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 ZNF333Q96JL9 665 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 ALG13Q9NP73 1137 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 PCMTD2Q9NV79 361 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 FRMD4BQ9Y2L6 1034 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 ASB3Q9Y575 518 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 EXOC1LA0A1B0GW35 172 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 USP17L10C9JJH3 530 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 PPP1R11O60927 126 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 FAM13AO94988 1023 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 GJC1P36383 396 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 YARSP54577 528 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 MYL7Q01449 175 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 KPNB1Q14974 876 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 HHATQ5VTY9 493 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 OLIG1Q8TAK6 271 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 FBXO41Q8TF61 875 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 SNF8Q96H20 258 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 NUP85Q9BW27 656 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 JMJD4Q9H9V9 463 aa12.32□□□□□ -0.44
HMGCS1-202ENST00000433297 A0A0G2JND7 137 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 TGFB1I1O43294 461 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ITIH2P19823 946 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 POLD1P28340 1107 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 CCDC15Q0P6D6 951 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 SPARCL1Q14515 664 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 SLC5A9Q2M3M2 681 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 WASHC2DQ5SRD0 308 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 GSTA5Q7RTV2 222 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 GPR88Q9GZN0 384 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 SMAPO00193 183 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 EXOC3O60645 756 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 PIAS1O75925 651 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ALAS1P13196 640 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 BTDP43251 543 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 OR52E8Q6IFG1 317 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 IRGCQ6NXR0 463 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 SYCP3Q8IZU3 236 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 INPP5DQ92835 1189 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 WNT8AQ9H1J5 351 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 GYG2O15488 501 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 CHMP2AO43633 222 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 PTPN4P29074 926 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 RPA3P35244 121 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 TBC1D25Q3MII6 688 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 FOXB2Q5VYV0 432 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 DRAXINQ8NBI3 349 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ERMNQ8TAM6 284 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ELMO3Q96BJ8 720 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 ZNF653Q96CK0 615 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 SLAIN2Q9P270 581 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 LRCH1Q9Y2L9 728 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 STARD13Q9Y3M8 1113 aa12.31□□□□□ -0.44
HMGCS1-202ENST00000433297 COL18A1P39060 1754 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 PNMA6FA0A0J9YX94 578 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms