RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 SLC38A7Q9NVC3 462 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 ADAM28Q9UKQ2 775 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 USTQ9Y2C2 406 aa10.04□□□□□ -0.8
HDAC9-211ENST00000430454 VWA3AA6NCI4 1184 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 FAM86C2PA6NEL3 165 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 C2CD2LO14523 706 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 CNPP09543 421 aaKnown RBP10.03□□□□□ -0.8
HDAC9-211ENST00000430454 EPCAMP16422 314 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 GUCY2CP25092 1073 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 CLCN4P51793 760 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 PEX3P56589 373 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
HDAC9-211ENST00000430454 DSG1Q02413 1049 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 KYAT1Q16773 422 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 PTPN21Q16825 1174 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 CCDC149Q6ZUS6 474 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 SUGP1Q8IWZ8 645 aaKnown RBP10.03□□□□□ -0.8
HDAC9-211ENST00000430454 CMASQ8NFW8 434 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-211ENST00000430454 BCL7CQ8WUZ0 217 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-211ENST00000430454 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC9-211ENST00000430454 CCDC113Q9H0I3 377 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 PLEKHA4Q9H4M7 779 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 RXFP1Q9HBX9 757 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 SNTG2Q9NY99 539 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 KLK14Q9P0G3 267 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 FNIP2Q9P278 1114 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 LARSQ9P2J5 1176 aaKnown RBP10.03□□□□□ -0.8
HDAC9-211ENST00000430454 TNFSF13BQ9Y275 285 aa10.03□□□□□ -0.8
HDAC9-211ENST00000430454 ATG2AQ2TAZ0 1938 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 E9PMD0 336 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 HIP1RO75146 1068 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 RECQL4O94761 1208 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 KRT18P05783 430 aaKnown RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 MCF2P10911 925 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 PLS3P13797 630 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 LONP1P36776 959 aaKnown RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 PLA2G5P39877 138 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 TXLNAP40222 546 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 NPTX2P47972 431 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 AFF1P51825 1210 aaKnown RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 ZXDAP98168 799 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 MTMR3Q13615 1198 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 ZNF568Q3ZCX4 644 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 HYIQ5T013 277 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 KIAA0319Q5VV43 1072 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 RINT1Q6NUQ1 792 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 FUT10Q6P4F1 479 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 DCLRE1AQ6PJP8 1040 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 BMP8AQ7Z5Y6 402 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 GPR149Q86SP6 731 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 CDR2LQ86X02 465 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 SYT2Q8N9I0 419 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 RIN2Q8WYP3 895 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 BSNDQ8WZ55 320 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 NTPCRQ9BSD7 190 aaKnown RBP10.02□□□□□ -0.81
HDAC9-211ENST00000430454 RHOBTB2Q9BYZ6 727 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 PIDD1Q9HB75 910 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 CHST7Q9NS84 486 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 MARCH5Q9NX47 278 aa10.02□□□□□ -0.81
HDAC9-211ENST00000430454 VPS37CA5D8V6 355 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-211ENST00000430454 TMEM221A6NGB7 291 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 M0R296 226 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 TEX28O15482 410 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 LILRB3O75022 631 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 PLA2G4BP0C869 781 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
HDAC9-211ENST00000430454 GRM5P41594 1212 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 MATR3P43243 847 aaKnown RBP eCLIP10.01□□□□□ -0.81
HDAC9-211ENST00000430454 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 ECM1Q16610 540 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 LIN9Q5TKA1 542 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 TMC5Q6UXY8 1006 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 RNF168Q8IYW5 571 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-211ENST00000430454 GSTCDQ8NEC7 633 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 PBXIP1Q96AQ6 731 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 ACAP3Q96P50 834 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 ACO2Q99798 780 aaKnown RBP10.01□□□□□ -0.81
HDAC9-211ENST00000430454 TTPALQ9BTX7 342 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 KIFC3Q9BVG8 833 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 VN1R3Q9BXE9 311 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 IRF2BPLQ9H1B7 796 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 C11orf16Q9NQ32 467 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 MAN1C1Q9NR34 630 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 MIOSQ9NXC5 875 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 ZDHHC7Q9NXF8 308 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 CCDC39Q9UFE4 941 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 ODF2LQ9ULJ1 636 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 SORCS3Q9UPU3 1222 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 GDAQ9Y2T3 454 aa10.01□□□□□ -0.81
HDAC9-211ENST00000430454 C5orf42Q9H799 3197 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 CCDC195A0A1B0GUA6 201 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 CASTOR2A6NHX0 329 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 PP2D1A8MPX8 630 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms