RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 GJB2P29033 226 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 DSG1Q02413 1049 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 SIGLEC14Q08ET2 396 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 PRPF4BQ13523 1007 aaKnown RBP13.01□□□□□ -0.33
HDAC4-202ENST00000430200 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
HDAC4-202ENST00000430200 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 PRSS55Q6UWB4 352 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-202ENST00000430200 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 SPATA31D4Q6ZUB0 917 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 GPR149Q86SP6 731 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 CABP7Q86V35 215 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 ZBTB8OSQ8IWT0 167 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 KREMEN2Q8NCW0 462 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 C3orf58Q8NDZ4 430 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 ERMNQ8TAM6 284 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 ZNF707Q96C28 371 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-202ENST00000430200 GOLGA2P5Q9HBQ8 144 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 RXFP1Q9HBX9 757 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 UBN1Q9NPG3 1134 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 MRPL17Q9NRX2 175 aaKnown RBP13.01□□□□□ -0.33
HDAC4-202ENST00000430200 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 NOL7Q9UMY1 257 aaKnown RBP13.01□□□□□ -0.33
HDAC4-202ENST00000430200 TCHHQ07283 1943 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 PHLPP2Q6ZVD8 1323 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 ACKR2O00590 384 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 N4BP3O15049 544 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
HDAC4-202ENST00000430200 HIP1RO75146 1068 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 KLRC2P26717 231 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 MTHFRP42898 656 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 ATP2C1P98194 919 aaPredicted RBP13□□□□□ -0.33
HDAC4-202ENST00000430200 NHLH1Q02575 133 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 GRIN1Q05586 938 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
HDAC4-202ENST00000430200 CES5AQ6NT32 575 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 BMP8AQ7Z5Y6 402 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 DEPTORQ8TB45 409 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 NECTIN4Q96NY8 510 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 CDT1Q9H211 546 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 GDAQ9Y2T3 454 aa13□□□□□ -0.33
HDAC4-202ENST00000430200 MUTP22033 750 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 PRPHP41219 470 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 NPTX2P47972 431 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 PEX3P56589 373 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 RAD51AP2Q09MP3 1159 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 TUSC3Q13454 348 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 GIT2Q14161 759 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 HSP90AA2PQ14568 343 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-202ENST00000430200 MAPK6Q16659 721 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 C1orf186Q6ZWK4 172 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 TDRD5Q8NAT2 981 aaKnown RBP12.99□□□□□ -0.33
HDAC4-202ENST00000430200 RIN2Q8WYP3 895 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-202ENST00000430200 PBXIP1Q96AQ6 731 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 RIPOR3Q96MK2 946 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 PPP1R10Q96QC0 940 aaKnown RBP12.99□□□□□ -0.33
HDAC4-202ENST00000430200 PLIN2Q99541 437 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 EMILIN2Q9BXX0 1053 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 C2orf40Q9H1Z8 148 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
HDAC4-202ENST00000430200 SCN1AP35498 2009 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 OBSL1O75147 1896 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 NPHP3-ACAD11A0A0J9YXS1 232 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 CARNS1A5YM72 827 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 I3L4J1 428 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 TGM5O43548 720 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 PAPLNO95428 1278 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-202ENST00000430200 TCF15Q12870 199 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 PDIA5Q14554 519 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 TMEM119Q4V9L6 283 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 HYIQ5T013 277 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 ATF7IP2Q5U623 682 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 MCTP1Q6DN14 999 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 RINT1Q6NUQ1 792 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 LILRA6Q6PI73 481 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 RSPO2Q6UXX9 243 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-202ENST00000430200 PPFIBP1Q86W92 1011 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 PALB2Q86YC2 1186 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 ST13P5Q8NFI4 369 aaPredicted RBP12.98□□□□□ -0.33
HDAC4-202ENST00000430200 KIFAP3Q92845 792 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
HDAC4-202ENST00000430200 HAPLN2Q9GZV7 340 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 PTPRHQ9HD43 1115 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 LIMD1Q9UGP4 676 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 SORCS3Q9UPU3 1222 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 DMXL1Q9Y485 3027 aa12.98□□□□□ -0.33
HDAC4-202ENST00000430200 CLUHO75153 1309 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.338e-6■■■■■ 107
HDAC4-202ENST00000430200 VWA3AA6NCI4 1184 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 SFI1A8K8P3 1242 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 ST18O60284 1047 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 GLUD1P00367 558 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 ADH1AP07327 375 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 PROZP22891 400 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms