RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 YARSP54577 528 aaKnown RBP16.79■□□□□ 0.28
COL11A1-204ENST00000427239 SNRNP35Q16560 246 aaKnown RBP16.79■□□□□ 0.28
COL11A1-204ENST00000427239 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
COL11A1-204ENST00000427239 TET1Q8NFU7 2136 aa16.79■□□□□ 0.28
COL11A1-204ENST00000427239 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
COL11A1-204ENST00000427239 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.79■□□□□ 0.28
COL11A1-204ENST00000427239 MTIF3Q9H2K0 278 aaKnown RBP16.79■□□□□ 0.28
COL11A1-204ENST00000427239 TOPORSQ9NS56 1045 aaPredicted RBP16.79■□□□□ 0.28
COL11A1-204ENST00000427239 CPSF3Q9UKF6 684 aaKnown RBP16.79■□□□□ 0.28
COL11A1-204ENST00000427239 PCDHB7Q9Y5E2 793 aa16.79■□□□□ 0.28
COL11A1-204ENST00000427239 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
COL11A1-204ENST00000427239 BECN2A8MW95 431 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 GNA14O95837 355 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 ITGA4P13612 1032 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 MAGEA10P43363 369 aaPredicted RBP16.78■□□□□ 0.28
COL11A1-204ENST00000427239 EPHB4P54760 987 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 CRELD2Q6UXH1 353 aaPredicted RBP16.78■□□□□ 0.28
COL11A1-204ENST00000427239 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 ZNF598Q86UK7 904 aaKnown RBP16.78■□□□□ 0.28
COL11A1-204ENST00000427239 CEP120Q8N960 986 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 FAM200AQ8TCP9 573 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 NXF3Q9H4D5 531 aaKnown RBP16.78■□□□□ 0.28
COL11A1-204ENST00000427239 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 SNTG2Q9NY99 539 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 GIT1Q9Y2X7 761 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 HES2Q9Y543 173 aa16.78■□□□□ 0.28
COL11A1-204ENST00000427239 GOLGA8IPA6NC78 632 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 GOLGA8JA6NMD2 632 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 SLC16A3O15427 465 aaKnown RBP16.77■□□□□ 0.28
COL11A1-204ENST00000427239 AKAP3O75969 853 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 AMHP03971 560 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 KCNJ6P48051 423 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 OSTNP61366 133 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 CD302Q8IX05 232 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 CRIPAKQ8N1N5 446 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 RDH13Q8NBN7 331 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 RSPH1Q8WYR4 309 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 HERVK_113Q902F9 699 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 TOP1MTQ969P6 601 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 EEF2KMTQ96G04 330 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 THAP9Q9H5L6 903 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 RPF1Q9H9Y2 349 aaKnown RBP16.77■□□□□ 0.28
COL11A1-204ENST00000427239 LRFN2Q9ULH4 789 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.28
COL11A1-204ENST00000427239 H0YGN5 161 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 HOXA2O43364 376 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 EPB41P11171 864 aaKnown RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 CASP4P49662 377 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 WDR5P61964 334 aaKnown RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 MLLT1Q03111 559 aaPredicted RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 SEZ6Q53EL9 994 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 USP37Q86T82 979 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 CBWD2Q8IUF1 395 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 NPAS4Q8IUM7 802 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 ZSWIM2Q8NEG5 633 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 TSPAN18Q96SJ8 248 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 CBX8Q9HC52 389 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 METTL14Q9HCE5 456 aaKnown RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 PCDH10Q9P2E7 1040 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 CEP290O15078 2479 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 LTBP2Q14767 1821 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 RBAK-RBAKDNI3L0D1 243 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 ADRB2P07550 413 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 ATF7P17544 494 aaPredicted RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 AKAP5P24588 427 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 TNFSF9P41273 254 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 ENPEPQ07075 957 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 IQCB1Q15051 598 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 SURF1Q15526 300 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 ENOX2Q16206 610 aaKnown RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 AGMOQ6ZNB7 445 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 INTS8Q75QN2 995 aaKnown RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 FRMD5Q7Z6J6 570 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 FAM186BQ8IYM0 893 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 AOPEPQ8N6M6 819 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 RNF169Q8NCN4 708 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 GDF15Q99988 308 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 ASB7Q9H672 318 aa16.76■□□□□ 0.27
COL11A1-204ENST00000427239 RBAKQ9NYW8 714 aaPredicted RBP16.76■□□□□ 0.27
COL11A1-204ENST00000427239 RANBP2P49792 3224 aaKnown RBP16.75■□□□□ 0.27
COL11A1-204ENST00000427239 TTC26A0AVF1 554 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 ZBBXA8MT70 800 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 RECQL4O94761 1208 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 IL18RAPO95256 599 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 MARSP56192 900 aaKnown RBP16.75■□□□□ 0.27
COL11A1-204ENST00000427239 MCCD1P59942 119 aaPredicted RBP16.75■□□□□ 0.27
COL11A1-204ENST00000427239 NCAPHQ15003 741 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 SLC10A6Q3KNW5 377 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 ZBTB41Q5SVQ8 909 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 ALKAL1Q6UXT8 129 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 BRSK2Q8IWQ3 736 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 TMEM192Q8IY95 271 aa16.75■□□□□ 0.27
COL11A1-204ENST00000427239 PHOSPHO2Q8TCD6 241 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms