RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 MYH11P35749 1972 aa8.17□□□□□ -1.1
LINC01049-201ENST00000426840 A0A1W2PPC1 479 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 FRMD3A2A2Y4 597 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 CCDC169A6NNP5 214 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 SOBPA7XYQ1 873 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 C9IYK1 514 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 K7ERI5 159 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 ACKR2O00590 384 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 B4GALT5O43286 388 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 KLRC4O43908 158 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 TRAK2O60296 914 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 TSPAN1O60635 241 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 EFCAB14O75071 495 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 FAM13AO94988 1023 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 EDN1P05305 212 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 KRT18P05783 430 aaKnown RBP8.16□□□□□ -1.1
LINC01049-201ENST00000426840 SFPQP23246 707 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC01049-201ENST00000426840 NMT1P30419 496 aaKnown RBP8.16□□□□□ -1.1
LINC01049-201ENST00000426840 AXLP30530 894 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 AFMP43652 599 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 EFNA5P52803 228 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 TTC3P53804 2025 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 NCKAP1LP55160 1127 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 DEFB103AP81534 67 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 CUL4BQ13620 913 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 PCBP1Q15365 356 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC01049-201ENST00000426840 UBXN11Q5T124 520 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 NT5DC1Q5TFE4 455 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 FAM109BQ6ICB4 259 aaPredicted RBP8.16□□□□□ -1.1
LINC01049-201ENST00000426840 MICAL3Q7RTP6 2002 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 CATSPER4Q7RTX7 472 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 ZNF720Q7Z2F6 126 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 HAUS6Q7Z4H7 955 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 CEP57L1Q8IYX8 460 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 TMEM161BQ8NDZ6 487 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 PHOSPHO2Q8TCD6 241 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 TOP1MTQ969P6 601 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 RNPC3Q96LT9 517 aaKnown RBP8.16□□□□□ -1.1
LINC01049-201ENST00000426840 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 STRA6Q9BX79 667 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 C2orf40Q9H1Z8 148 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 BLZF1Q9H2G9 400 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 PARVGQ9HBI0 331 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 LMBRD1Q9NUN5 540 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 AGPAT5Q9NUQ2 364 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 PANK4Q9NVE7 773 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 USP20Q9Y2K6 914 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 SLC4A7Q9Y6M7 1214 aa8.16□□□□□ -1.1
LINC01049-201ENST00000426840 A0A0U1RQF3 1178 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 A0A1B0GUA9 196 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 PVALEFA0A1B0GWK0 134 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 GRXCR1A8MXD5 290 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ZNF623O75123 536 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 PRKCBP05771 671 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 MAPTP10636 758 aaKnown RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 IDEP14735 1019 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ZSCAN20P17040 1043 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 GAP43P17677 238 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ARF4P18085 180 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 SMTNP53814 917 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 UBE2HP62256 183 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 GTF2BQ00403 316 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 RELBQ01201 579 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 FAM160A1Q05DH4 1040 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 EHHADHQ08426 723 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 DPYDQ12882 1025 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 DMP1Q13316 513 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 MAPK6Q16659 721 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 LRIT3Q3SXY7 679 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ZC2HC1CQ53FD0 456 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 HERC4Q5GLZ8 1057 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 UNC13DQ70J99 1090 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 SLC24A5Q71RS6 500 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 TMCO2Q7Z6W1 182 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 MRPL10Q7Z7H8 261 aaKnown RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 SFR1Q86XK3 245 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ZBTB8OSQ8IWT0 167 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 CCDC65Q8IXS2 484 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 CNNM3Q8NE01 707 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ZNF775Q96BV0 537 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 CPB2Q96IY4 423 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 TIGD1Q96MW7 591 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 MTIF3Q9H2K0 278 aaKnown RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ST6GALNAC4Q9H4F1 302 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 ZHX3Q9H4I2 956 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 C1orf112Q9NSG2 853 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 PRMT7Q9NVM4 692 aaPredicted RBP8.15□□□□□ -1.1
LINC01049-201ENST00000426840 SEL1LQ9UBV2 794 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 PCDHB11Q9Y5F2 797 aa8.15□□□□□ -1.1
LINC01049-201ENST00000426840 PTPRSQ13332 1948 aa8.15□□□□□ -1.11
LINC01049-201ENST00000426840 DENND3A2RUS2 1198 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 TBCAO75347 108 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ERLIN2O94905 339 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 AMHP03971 560 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 MYL1P05976 194 aa8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ATP2A2P16615 1042 aaKnown RBP8.14□□□□□ -1.11
LINC01049-201ENST00000426840 ATF7P17544 494 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms