RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 DDHD2O94830 711 aa12□□□□□ -0.49
USP49-204ENST00000423567 EDN1P05305 212 aa12□□□□□ -0.49
USP49-204ENST00000423567 SRGAP2BP0DMP2 458 aa12□□□□□ -0.49
USP49-204ENST00000423567 MAPTP10636 758 aaKnown RBP12□□□□□ -0.49
USP49-204ENST00000423567 MATR3P43243 847 aaKnown RBP eCLIP12□□□□□ -0.49
USP49-204ENST00000423567 OR1G1P47890 313 aa12□□□□□ -0.49
USP49-204ENST00000423567 NRIP1P48552 1158 aa12□□□□□ -0.49
USP49-204ENST00000423567 SLC11A1P49279 550 aa12□□□□□ -0.49
USP49-204ENST00000423567 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
USP49-204ENST00000423567 ZNF131P52739 623 aa12□□□□□ -0.49
USP49-204ENST00000423567 NCKAP1LP55160 1127 aa12□□□□□ -0.49
USP49-204ENST00000423567 ERVFC1P60507 584 aa12□□□□□ -0.49
USP49-204ENST00000423567 HYAL1Q12794 435 aa12□□□□□ -0.49
USP49-204ENST00000423567 PKP1Q13835 747 aa12□□□□□ -0.49
USP49-204ENST00000423567 GIT2Q14161 759 aa12□□□□□ -0.49
USP49-204ENST00000423567 PUS10Q3MIT2 529 aaKnown RBP12□□□□□ -0.49
USP49-204ENST00000423567 HAUS6Q7Z4H7 955 aa12□□□□□ -0.49
USP49-204ENST00000423567 DDX53Q86TM3 631 aaKnown RBP12□□□□□ -0.49
USP49-204ENST00000423567 RBM23Q86U06 439 aaKnown RBP12□□□□□ -0.49
USP49-204ENST00000423567 FAM178BQ8IXR5 827 aa12□□□□□ -0.49
USP49-204ENST00000423567 VPS52Q8N1B4 723 aa12□□□□□ -0.49
USP49-204ENST00000423567 PDILTQ8N807 584 aa12□□□□□ -0.49
USP49-204ENST00000423567 LRRC15Q8TF66 581 aa12□□□□□ -0.49
USP49-204ENST00000423567 CDCA3Q99618 268 aaPredicted RBP12□□□□□ -0.49
USP49-204ENST00000423567 CCDC94Q9BW85 323 aaPredicted RBP12□□□□□ -0.49
USP49-204ENST00000423567 TOPORSQ9NS56 1045 aaPredicted RBP12□□□□□ -0.49
USP49-204ENST00000423567 FAM13BQ9NYF5 915 aa12□□□□□ -0.49
USP49-204ENST00000423567 DNAJB4Q9UDY4 337 aa12□□□□□ -0.49
USP49-204ENST00000423567 FAM50BQ9Y247 325 aa12□□□□□ -0.49
USP49-204ENST00000423567 GDAQ9Y2T3 454 aa12□□□□□ -0.49
USP49-204ENST00000423567 PRG3Q9Y2Y8 225 aaPredicted RBP12□□□□□ -0.49
USP49-204ENST00000423567 TRANK1O15050 2925 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 NRP1O14786 923 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 TOM1L1O75674 476 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 BRD1O95696 1058 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 THP07101 528 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 MCF2P10911 925 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
USP49-204ENST00000423567 GAP43P17677 238 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 NDUFV1P49821 464 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 KRT85P78386 507 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
USP49-204ENST00000423567 LEXMQ3ZCV2 418 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 MPZL3Q6UWV2 235 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 ZPBP2Q6X784 338 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 DYMQ7RTS9 669 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 TAS1R3Q7RTX0 852 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 ADGRD2Q7Z7M1 963 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 ZBTB33Q86T24 672 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 COLGALT2Q8IYK4 626 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 EFHBQ8N7U6 833 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 IQUBQ8NA54 791 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 PYM1Q9BRP8 204 aaKnown RBP11.99□□□□□ -0.49
USP49-204ENST00000423567 COLEC11Q9BWP8 271 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 CDT1Q9H211 546 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 CUEDC2Q9H467 287 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 ANKFY1Q9P2R3 1169 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 PCDHGC5Q9Y5F6 944 aa11.99□□□□□ -0.49
USP49-204ENST00000423567 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.98□□□□□ -0.49
USP49-204ENST00000423567 H3BQ06 376 aaPredicted RBP11.98□□□□□ -0.49
USP49-204ENST00000423567 DLL1O00548 723 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
USP49-204ENST00000423567 PER2O15055 1255 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 CLDN3O15551 220 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 CXCL14O95715 111 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 IDEP14735 1019 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 GRM5P41594 1212 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 LIG4P49917 911 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 KCNQ1P51787 676 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 OSTNP61366 133 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 AMPD3Q01432 767 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 DSC1Q08554 894 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 TUSC3Q13454 348 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 NOLC1Q14978 699 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP49-204ENST00000423567 COL19A1Q14993 1142 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 TMEM173Q86WV6 379 aaPredicted RBP11.98□□□□□ -0.49
USP49-204ENST00000423567 DDX12PQ92771 950 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 ACAP3Q96P50 834 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 ZBP1Q9H171 429 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 PTPRHQ9HD43 1115 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 MIOSQ9NXC5 875 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 SEL1LQ9UBV2 794 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 TBX20Q9UMR3 447 aa11.98□□□□□ -0.49
USP49-204ENST00000423567 KIAA1671Q9BY89 1806 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 HIDE1A8MVS5 230 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 B4GALT3O60512 393 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 URODP06132 367 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 CTSAP10619 480 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 PROZP22891 400 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 GTF2F1P35269 517 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP49-204ENST00000423567 ADAM15Q13444 863 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 KYAT1Q16773 422 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 DUSP6Q16828 381 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 CTC1Q2NKJ3 1217 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 AXDND1Q5T1B0 1012 aaPredicted RBP11.97□□□□□ -0.49
USP49-204ENST00000423567 KIAA1841Q6NSI8 718 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 SFR1Q86XK3 245 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 MRPL43Q8N983 215 aaKnown RBP11.97□□□□□ -0.49
USP49-204ENST00000423567 GSTCDQ8NEC7 633 aa11.97□□□□□ -0.49
USP49-204ENST00000423567 ADAMTS19Q8TE59 1207 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms