RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 EXD1Q8NHP7 514 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 FBXO25Q8TCJ0 367 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 TMIGD2Q96BF3 282 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 NEURL2Q9BR09 285 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 SLC26A6Q9BXS9 759 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ATP13A3Q9H7F0 1226 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 CABP5Q9NP86 173 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PTTG2Q9NZH5 202 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 PPM1HQ9ULR3 514 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 ERVK-7P63135 1459 aa7.28□□□□□ -1.24
CNOT4-205ENST00000423368 YEATS2Q9ULM3 1422 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ANKRD62A6NC57 917 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CCDC169A6NNP5 214 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 MEN1O00255 615 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ICMTO60725 284 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PIAS1O75925 651 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ALDH2P05091 517 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 IDO1P14902 403 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 KLRC1P26715 233 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ANXA13P27216 316 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ERCC5P28715 1186 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ADSLP30566 484 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 MAGEA4P43358 317 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 BCAP31P51572 246 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CACNB3P54284 484 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PTPN5P54829 565 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CSE1LP55060 971 aaKnown RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 KDSRQ06136 332 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 AP1B1Q10567 949 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ITGADQ13349 1161 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ZNF211Q13398 564 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 MTMR3Q13615 1198 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PDK1Q15118 436 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 NONOQ15233 471 aaKnown RBP eCLIP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PTPAQ15257 358 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CCDC58Q4VC31 144 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 DALRD3Q5D0E6 543 aaKnown RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CGB2Q6NT52 195 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 TRAF7Q6Q0C0 670 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ZFPM1Q8IX07 1006 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ZBED8Q8IZ13 594 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 SSH3Q8TE77 659 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 SH3RF3Q8TEJ3 882 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 DIS3LQ8TF46 1054 aaKnown RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 INPP5DQ92835 1189 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CITED4Q96RK1 184 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 MXD3Q9BW11 206 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 SHCBP1LQ9BZQ2 653 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 LRMDAQ9H2I8 198 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 FBXO6Q9NRD1 293 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 C6orf203Q9P0P8 240 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ADGRL3Q9HAR2 1447 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ARHGAP42A6NI28 874 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 SRRM3A6NNA2 597 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 TAF4O00268 1085 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 KLHL41O60662 606 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 SERPINB6P35237 376 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 GJC1P36383 396 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 NR4A2P43354 598 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 GSSP48637 474 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 AP3M2P53677 418 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 LDLRAP1Q5SW96 308 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 UBE2UQ5VVX9 321 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PRUNE1Q86TP1 453 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 TMPRSS6Q8IU80 811 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 METTL25Q8N6Q8 603 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 USP38Q8NB14 1042 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 TBC1D16Q8TBP0 767 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ATP2A3Q93084 1043 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 ANKRD36BP1Q96IX9 119 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 FAR2Q96K12 515 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 COX4I2Q96KJ9 171 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 UCN2Q96RP3 112 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 MRPL9Q9BYD2 267 aaKnown RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CRNKL1Q9BZJ0 848 aaKnown RBP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PARVBQ9HBI1 364 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 KCNQ5Q9NR82 932 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.27□□□□□ -1.25
CNOT4-205ENST00000423368 MCM9Q9NXL9 1143 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 HMG20BQ9P0W2 317 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PACSIN3Q9UKS6 424 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 SPEF1Q9Y4P9 236 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 EMSYQ7Z589 1322 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 REREQ9P2R6 1566 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 PDS5BQ9NTI5 1447 aa7.27□□□□□ -1.25
CNOT4-205ENST00000423368 CDK2AP1O14519 115 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 PRPF3O43395 683 aaKnown RBP7.26□□□□□ -1.25
CNOT4-205ENST00000423368 MARCH6O60337 910 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 PGM1P36871 562 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 PDK3Q15120 406 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 TRIP10Q15642 601 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 SFT2D3Q587I9 215 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 KIAA1755Q5JYT7 1200 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 C1orf146Q5VVC0 180 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 AAGABQ6PD74 315 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 TAS2R42Q7RTR8 314 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 AMIGO2Q86SJ2 522 aa7.26□□□□□ -1.25
CNOT4-205ENST00000423368 RALGPS2Q86X27 583 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-205ENST00000423368 CENPSQ8N2Z9 138 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms