RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 GCOM2Q9BZD3 368 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 NDST4Q9H3R1 872 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
HPS4-204ENST00000422379 TNFSF13BQ9Y275 285 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 TRPV2Q9Y5S1 764 aa9.76□□□□□ -0.85
HPS4-204ENST00000422379 CLDN3O15551 220 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 PQBP1O60828 265 aaKnown RBP9.75□□□□□ -0.85
HPS4-204ENST00000422379 TNNT1P13805 278 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 SCP2P22307 547 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 ADKP55263 362 aaKnown RBP9.75□□□□□ -0.85
HPS4-204ENST00000422379 OSTNP61366 133 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 CYP24A1Q07973 514 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 KCNMA1Q12791 1236 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 BFSP1Q12934 665 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 LPIN1Q14693 890 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 MAN2A1Q16706 1144 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 DCAF17Q5H9S7 520 aaPredicted RBP9.75□□□□□ -0.85
HPS4-204ENST00000422379 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 MPZL3Q6UWV2 235 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 SLC39A5Q6ZMH5 540 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 FAM114A1Q8IWE2 563 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 GPD1LQ8N335 351 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 MFSD14AQ96MC6 490 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 AGPAT5Q9NUQ2 364 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 SIK3Q9Y2K2 1263 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 HES2Q9Y543 173 aa9.75□□□□□ -0.85
HPS4-204ENST00000422379 ITIH6Q6UXX5 1313 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 UQCRHLA0A096LP55 91 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 LRRIQ3A6PVS8 624 aaPredicted RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 EXTL3O43909 919 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 MGEA5O60502 916 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 FGFR1OPO95684 399 aaKnown RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 GNA14O95837 355 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 UQCRHP07919 91 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 TPM2P07951 284 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 GHRP10912 638 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 EPB41P11171 864 aaKnown RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 ABCD1P33897 745 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 UBXN1Q04323 297 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 KCNH2Q12809 1159 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 ENOX2Q16206 610 aaKnown RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 TCTN1Q2MV58 587 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 ZNF568Q3ZCX4 644 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 TRIM60Q495X7 471 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 FAM26DQ5JW98 314 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 FBXO47Q5MNV8 452 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 LMBRD2Q68DH5 695 aaPredicted RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 CATSPER4Q7RTX7 472 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 HS6ST3Q8IZP7 471 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 ANKRD20A12PQ8NF67 263 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 PARD3BQ8TEW8 1205 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 ZNF516Q92618 1163 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 ELMO3Q96BJ8 720 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 CCDC127Q96BQ5 260 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 PAWRQ96IZ0 340 aaKnown RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 PPP1R13BQ96KQ4 1090 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 CRACR2AQ9BSW2 395 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 PDE11AQ9HCR9 933 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 CPSF3Q9UKF6 684 aaKnown RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 ST3GAL5Q9UNP4 418 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 FRMD4BQ9Y2L6 1034 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 SSUH2Q9Y2M2 353 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.74□□□□□ -0.85
HPS4-204ENST00000422379 AKR1B15C9JRZ8 316 aaPredicted RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 ERLIN2O94905 339 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 GYPCP04921 128 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 CD52P31358 61 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 VAMP7P51809 220 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 FAAP100Q0VG06 881 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 SYCP1Q15431 976 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 PTPN14Q15678 1187 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 LRRC26Q2I0M4 334 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 ANKRD33Q7Z3H0 272 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 THNSL1Q8IYQ7 743 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 VWCEQ96DN2 955 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 BAG1Q99933 345 aaPredicted RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 TCHPQ9BT92 498 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 MMRN2Q9H8L6 949 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 RNF19AQ9NV58 838 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 PIN4Q9Y237 131 aaKnown RBP9.74□□□□□ -0.85
HPS4-204ENST00000422379 NOD1Q9Y239 953 aa9.74□□□□□ -0.85
HPS4-204ENST00000422379 MEIS3P2A8K0S8 358 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 PES1O00541 588 aaKnown RBP9.73□□□□□ -0.85
HPS4-204ENST00000422379 MAPK13O15264 365 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 OGTO15294 1046 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 ARHGAP6O43182 974 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 MFAP3LO75121 409 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 NOL4O94818 638 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 CXCL8P10145 99 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 EN2P19622 333 aaPredicted RBP9.73□□□□□ -0.85
HPS4-204ENST00000422379 MATR3P43243 847 aaKnown RBP eCLIP9.73□□□□□ -0.85
HPS4-204ENST00000422379 GCLMP48507 274 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 CDC42EP1Q00587 391 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 TLE2Q04725 743 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 RBL2Q08999 1139 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 TCERG1LQ5VWI1 586 aa9.73□□□□□ -0.85
HPS4-204ENST00000422379 SLFN12LQ6IEE8 588 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms