RNA–Protein interactions for RNA: ENST00000420541.6

TNFSF10-202, Transcript of TNF superfamily member 10, humanhuman

TSL 1 (best) BASIC

Gene TNFSF10, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF10-202ENST00000420541 CBWD6Q4V339 395 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 CBWD3Q5JTY5 395 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 CBWD5Q5RIA9 395 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 KRT39Q6A163 491 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 CXCL17Q6UXB2 119 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 APBB1IPQ7Z5R6 666 aaPredicted RBP13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 RNF180Q86T96 592 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 GANQ9H2C0 597 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 IFT122Q9HBG6 1241 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 TRMT1Q9NXH9 659 aaKnown RBP13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 BCCIPQ9P287 314 aaKnown RBP eCLIP13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 FBXL5Q9UKA1 691 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 MYO6Q9UM54 1294 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 TNFSF13BQ9Y275 285 aa13.58□□□□□ -0.24
TNFSF10-202ENST00000420541 GOLGA6L9A6NEM1 432 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PMM2O15305 246 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 IPO7O95373 1038 aaKnown RBP13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 EDN1P05305 212 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 CCDC175P0C221 793 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 ACTN1P12814 892 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 UCHL3P15374 230 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 TNNI1P19237 187 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 RFX1P22670 979 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 CDK17Q00537 523 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PPP3CAQ08209 521 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 RAPGEF1Q13905 1077 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 ASIC2Q16515 512 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 MEA1Q16626 185 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 TRIM65Q6PJ69 517 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 NME8Q8N427 588 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PLEKHO2Q8TD55 490 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 BAP1Q92560 729 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 TMEM117Q9H0C3 514 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 CNTNAP2Q9UHC6 1331 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 TREHO43280 583 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 B4GALT5O43286 388 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 ADAMTS4O75173 837 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 HNRNPH3P31942 346 aaKnown RBP13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PSEN1P49768 467 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PCBP1Q15365 356 aaKnown RBP eCLIP13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 KYAT1Q16773 422 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 NBPF20Q3BBV1 942 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 FAM47CQ5HY64 1035 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 C1orf220Q5T0J3 134 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 E4F1Q66K89 784 aaPredicted RBP13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 TAF2Q6P1X5 1199 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 RUFY4Q6ZNE9 571 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 RSPH3Q86UC2 560 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 CCDC170Q8IYT3 715 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PPP1R13LQ8WUF5 828 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 DNAJB3Q8WWF6 145 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 CCDC42Q96M95 316 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 HAPLN2Q9GZV7 340 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 DEF6Q9H4E7 631 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 MINDY3Q9H8M7 445 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PLAGL2Q9UPG8 496 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 PPP2R2CQ9Y2T4 447 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 KAT6AQ92794 2004 aa13.57□□□□□ -0.24
TNFSF10-202ENST00000420541 CABYRO75952 493 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 INHAP05111 366 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 MCF2P10911 925 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 PROZP22891 400 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 CST5P28325 142 aaPredicted RBP13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 AP3M2P53677 418 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 TMEM62Q0P6H9 643 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 KCNA10Q16322 511 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 EPC2Q52LR7 807 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 RAD9BQ6WBX8 426 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 TOGARAM2Q6ZUX3 1019 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 CATSPER4Q7RTX7 472 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 BRSK2Q8IWQ3 736 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 KLHDC9Q8NEP7 349 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 POP1Q99575 1024 aaKnown RBP13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 CHP1Q99653 195 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 CGRRF1Q99675 332 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 ADPGKQ9BRR6 497 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 HMX1Q9NP08 348 aaPredicted RBP13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 SIX2Q9NPC8 291 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 APEX2Q9UBZ4 518 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 DNAJC12Q9UKB3 198 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 TRIM17Q9Y577 477 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 FHOD1Q9Y613 1164 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 EPN1Q9Y6I3 576 aaPredicted RBP13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 THSD7BQ9C0I4 1608 aa13.56□□□□□ -0.24
TNFSF10-202ENST00000420541 EVPLQ92817 2033 aa13.55□□□□□ -0.24
TNFSF10-202ENST00000420541 TTLL13PA6NNM8 815 aa13.55□□□□□ -0.24
TNFSF10-202ENST00000420541 M0QZ92 97 aa13.55□□□□□ -0.24
TNFSF10-202ENST00000420541 SERPING1P05155 500 aa13.55□□□□□ -0.24
TNFSF10-202ENST00000420541 RPLP2P05387 115 aaKnown RBP13.55□□□□□ -0.24
TNFSF10-202ENST00000420541 ASGR1P07306 291 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms