RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 CCL16O15467 120 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 MARCH6O60337 910 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 ZMYND10O75800 440 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 REC8O95072 547 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 PAPLNO95428 1278 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 SP9P0CG40 484 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 GCFC2P16383 781 aaKnown RBP14.3□□□□□ -0.12
LINC00339-203ENST00000420503 RFX1P22670 979 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 RARRES1P49788 294 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 OTUD6AQ7L8S5 288 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 NECAB1Q8N987 351 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 CNNM3Q8NE01 707 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 ITFG1Q8TB96 612 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 STAMQ92783 540 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 HSD17B14Q9BPX1 270 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 CLSTN3Q9BQT9 956 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 COLEC11Q9BWP8 271 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 TRIM6Q9C030 488 aaPredicted RBP14.3□□□□□ -0.12
LINC00339-203ENST00000420503 POLD4Q9HCU8 107 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 UBN1Q9NPG3 1134 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 HCFC1R1Q9NWW0 138 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 GIT1Q9Y2X7 761 aa14.3□□□□□ -0.12
LINC00339-203ENST00000420503 TBX3O15119 743 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 ASAP2O43150 1006 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 DKC1O60832 514 aaKnown RBP eCLIP14.29□□□□□ -0.12
LINC00339-203ENST00000420503 LMNAP02545 664 aaKnown RBP14.29□□□□□ -0.12
LINC00339-203ENST00000420503 CD72P21854 359 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 FSHRP23945 695 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 AXLP30530 894 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 GRIK3Q13003 919 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 SNW1Q13573 536 aaKnown RBP14.29□□□□□ -0.12
LINC00339-203ENST00000420503 HSP90AA2PQ14568 343 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-203ENST00000420503 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 DCLRE1AQ6PJP8 1040 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 RSPO2Q6UXX9 243 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-203ENST00000420503 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 CCDC51Q96ER9 411 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 RHOBTB2Q9BYZ6 727 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 TMEM60Q9H2L4 133 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 FBXW11Q9UKB1 542 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
LINC00339-203ENST00000420503 TPRP12270 2363 aaKnown RBP14.29□□□□□ -0.12
LINC00339-203ENST00000420503 A0A1B0GUA9 196 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 LRRIQ4A6NIV6 560 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 NRG2O14511 850 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-203ENST00000420503 TADA2AO75478 443 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 TFDP1Q14186 410 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 MXD4Q14582 209 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-203ENST00000420503 NAB2Q15742 525 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 FAM171A1Q5VUB5 890 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 EEF1DP3Q658K8 133 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 SLC27A1Q6PCB7 646 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 NOSTRINQ8IVI9 506 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 PJA1Q8NG27 643 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 LNX1Q8TBB1 728 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-203ENST00000420503 ING5Q8WYH8 240 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 KXD1Q9BQD3 176 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 KIFC3Q9BVG8 833 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 TM6SF1Q9BZW5 370 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 PLEKHA4Q9H4M7 779 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 PDZD7Q9H5P4 517 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 ZDHHC7Q9NXF8 308 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 SNTG2Q9NY99 539 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 FNIP2Q9P278 1114 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-203ENST00000420503 STK39Q9UEW8 545 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 SSX2IPQ9Y2D8 614 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 SIT1Q9Y3P8 196 aa14.28□□□□□ -0.12
LINC00339-203ENST00000420503 PATJQ8NI35 1801 aa14.27□□□□□ -0.12
LINC00339-203ENST00000420503 I3L4J1 428 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 JAK2O60674 1132 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 PFKFB2O60825 505 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 DGAT1O75907 488 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 RECQL4O94761 1208 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 LYPLA2O95372 231 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 C8AP07357 584 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 SPATA31C1P0DKV0 1188 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 LIG1P18858 919 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 TXKP42681 527 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 FOXK2Q01167 660 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 PSMD5Q16401 504 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 CALCRLQ16602 461 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 GLRA4Q5JXX5 417 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 CPLX2Q6PUV4 134 aaKnown RBP14.27□□□□□ -0.13
LINC00339-203ENST00000420503 CD300LGQ6UXG3 332 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 EXOC8Q8IYI6 725 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 FGF13Q92913 245 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 TTC12Q9H892 705 aaPredicted RBP14.27□□□□□ -0.13
LINC00339-203ENST00000420503 SLC2A4RGQ9NR83 387 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 POLIQ9UNA4 740 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 F5P12259 2224 aa14.27□□□□□ -0.13
LINC00339-203ENST00000420503 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00339-203ENST00000420503 BTBD18B2RXH4 712 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 MED24O75448 989 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 KRT2P35908 639 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 ST3GAL1Q11201 340 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 TUSC3Q13454 348 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 PHLDB3Q6NSJ2 640 aa14.26□□□□□ -0.13
LINC00339-203ENST00000420503 CYP26C1Q6V0L0 522 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms