RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 KIF22Q14807 665 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 ZACNQ401N2 412 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 SV2AQ7L0J3 742 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 RSRC2Q7L4I2 434 aaKnown RBP14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 PRMT7Q9NVM4 692 aaPredicted RBP14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 CPSF3Q9UKF6 684 aaKnown RBP14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 PCDHA13Q9Y5I0 950 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 CLDN3O15551 220 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 AKR1A1P14550 325 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 TMOD1P28289 359 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 PHKA2P46019 1235 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 GJA9P57773 515 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 CCDC122Q5T0U0 273 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 FBXO38Q6PIJ6 1188 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 MPZL3Q6UWV2 235 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 BRSK2Q8IWQ3 736 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 SLC30A5Q8TAD4 765 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 TRIB2Q92519 343 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 JAKMIP2Q96AA8 810 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 POP1Q99575 1024 aaKnown RBP14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 ADAMTS10Q9H324 1103 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 GABRQQ9UN88 632 aa14.5□□□□□ -0.09
TMEM50B-201ENST00000420455 SMIM10L2AP0DMW4 78 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 SMIM10L2BP0DMW5 78 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 CDC42EP1Q00587 391 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 PTK2Q05397 1052 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 GFPT1Q06210 699 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 DRAP1Q14919 205 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 DEFB115Q30KQ5 88 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 ZBTB41Q5SVQ8 909 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 ZNF571Q7Z3V5 609 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 ARHGEF19Q8IW93 802 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 FBXL13Q8NEE6 735 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 HELQQ8TDG4 1101 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 LMBR1Q8WVP7 490 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 CAPNS2Q96L46 248 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 CGRRF1Q99675 332 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 TSGA10Q9BZW7 698 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 SMIM35A0A1B0GVV1 85 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 CTAGE9A4FU28 777 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 BTNL10A8MVZ5 291 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 EFCAB8A8MWE9 144 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 OGTO15294 1046 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 AOC2O75106 756 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 KLHL30Q0D2K2 578 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 C10orf76Q5T2E6 689 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 PDCL2Q8N4E4 241 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 METTL13Q8N6R0 699 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 SPAG5Q96R06 1193 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 NAPGQ99747 312 aaPredicted RBP14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 RAB20Q9NX57 234 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 SALL4Q9UJQ4 1053 aa14.49□□□□□ -0.09
TMEM50B-201ENST00000420455 PTPRJQ12913 1337 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 KPNA6O60684 536 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 LRRN2O75325 713 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 H2AFXP16104 143 aaPredicted RBP14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 AP3M2P53677 418 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 HIC1Q14526 733 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 MFSD10Q14728 455 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 SRGAP1Q7Z6B7 1085 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 PDCL3Q9H2J4 239 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 TOPORSQ9NS56 1045 aaPredicted RBP14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 RBAKQ9NYW8 714 aaPredicted RBP14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 CDC23Q9UJX2 597 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 GPR32O75388 356 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 ACOT2P49753 483 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 PSEN2P49810 448 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 IGBP1P78318 339 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 PURAQ00577 322 aaKnown RBP14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 ATF7IP2Q5U623 682 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 NFRKBQ6P4R8 1299 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 CCDC127Q96BQ5 260 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 LENG1Q96BZ8 264 aaPredicted RBP14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 EPC1Q9H2F5 836 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 SCN10AQ9Y5Y9 1956 aa14.48□□□□□ -0.09
TMEM50B-201ENST00000420455 ZSCAN20P17040 1043 aaPredicted RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 MAP2K1Q02750 393 aaPredicted RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 PRPF4BQ13523 1007 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 PCBP1Q15365 356 aaKnown RBP eCLIP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 SPA17Q15506 151 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 KIAA0753Q2KHM9 967 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 KIAA1328Q86T90 577 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 TAS1R2Q8TE23 839 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 FAM81BQ96LP2 452 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 NLRP4Q96MN2 994 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 IFIH1Q9BYX4 1025 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 HDAC6Q9UBN7 1215 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 CAPN6Q9Y6Q1 641 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 RALGAPA2Q2PPJ7 1873 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 A0A087WZ62 844 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 ENC1O14682 589 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 EVI5O60447 810 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 VNN1O95497 513 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 ATP1A1P05023 1023 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 APLP1P51693 650 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 GCNT1Q02742 428 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 TDRD10Q5VZ19 366 aaKnown RBP14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 TRAPPC11Q7Z392 1133 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 FAM71AQ8IYT1 594 aa14.47□□□□□ -0.09
TMEM50B-201ENST00000420455 SHC3Q92529 594 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms