RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 FGFR4P22455 802 aa12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 RDXP35241 583 aaKnown RBP12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 COILP38432 576 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 RPL21P46778 160 aaKnown RBP12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 PARD3BQ8TEW8 1205 aa12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 SHC3Q92529 594 aa12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 NSRP1Q9H0G5 558 aaKnown RBP12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 GGA2Q9UJY4 613 aa12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 DHX15O43143 795 aaKnown RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 NUDT17P0C025 328 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 CETN2P41208 172 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 SNX1Q13596 522 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ZSWIM2Q8NEG5 633 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 TAS1R2Q8TE23 839 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 XPO6Q96QU8 1125 aaKnown RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 SEMA4AQ9H3S1 761 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ST6GALNAC4Q9H4F1 302 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 DDX20Q9UHI6 824 aaKnown RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 PCDHA10Q9Y5I2 948 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 CLDN3O15551 220 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 SHBGP04278 402 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 NSFP46459 744 aaKnown RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ZDHHC18Q9NUE0 388 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ATAD5Q96QE3 1844 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 GSTTP1A0A1W2PQM5 241 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 CHN1P15882 459 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 FNTAP49354 379 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 FMO1Q01740 532 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 DRP2Q13474 957 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 HVCN1Q96D96 273 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 FAM213AQ9BRX8 229 aa12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 MAP3K20Q9NYL2 800 aaKnown RBP12.53□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ANKRD63C9JTQ0 380 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 AGTP01019 485 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 LIG4P49917 911 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 TNFAIP1Q13829 316 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 PGM5Q15124 567 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 UGCGQ16739 394 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 ENOSF1Q7L5Y1 443 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 CCDC197Q8NCU1 140 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 GRK7Q8WTQ7 553 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 C1orf54Q8WWF1 131 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 CLEC4DQ8WXI8 215 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 PGM2Q96G03 612 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 HOMER3Q9NSC5 361 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 NOCTQ9UK39 431 aaKnown RBP12.52□□□□□ -0.4
CSPG4P3Y-201ENST00000418188 FSBPO95073 299 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 SCP2P22307 547 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 CTNNA2P26232 953 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 ATP5DP30049 168 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 MAN1A1P33908 653 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 NCKAP1LP55160 1127 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 BPIFB4P59827 614 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 SF3A3Q12874 501 aaKnown RBP eCLIP12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 STRN3Q13033 797 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 LIN9Q5TKA1 542 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 ACAD10Q6JQN1 1059 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 MAP4K3Q8IVH8 894 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 TMEM161BQ8NDZ6 487 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 SEMA4DQ92854 862 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 TRIM11Q96F44 468 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 PDCD2LQ9BRP1 358 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 TOPORSQ9NS56 1045 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 STK32BQ9NY57 414 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 CNOT7Q9UIV1 285 aaKnown RBP12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 ACSL3O95573 720 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 RARAP10276 462 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 RARGP13631 454 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 CCND2P30279 289 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 GJC1P36383 396 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 IFNAR2P48551 515 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 ZNF365Q70YC5 407 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 SV2AQ7L0J3 742 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 GPD1LQ8N335 351 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 PLEKHO2Q8TD55 490 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 SCLT1Q96NL6 688 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 MYH11P35749 1972 aa12.52□□□□□ -0.41
CSPG4P3Y-201ENST00000418188 H0YCG3 227 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms