RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 C12orf50Q8NA57 414 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF384Q8TF68 577 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 DDX50Q9BQ39 737 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 BTBD10Q9BSF8 475 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 MIS12Q9H081 205 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 IL1RAPL1Q9NZN1 696 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 MTUS1Q9ULD2 1270 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF804BA4D1E1 1349 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 UMODL1Q5DID0 1318 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 PALM3A6NDB9 673 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ECEL1O95672 775 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 FAM200BP0CF97 657 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ZCCHC18P0CG32 403 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CYP2D6P10635 497 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 SOX5P35711 763 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 INHBCP55103 352 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 PDK4Q16654 411 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 HERC4Q5GLZ8 1057 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ANKRD23Q86SG2 305 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 LZICQ8WZA0 190 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 SLCO2A1Q92959 643 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 IWS1Q96ST2 819 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ARPP21Q9UBL0 812 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 TRAF3IP3Q9Y228 551 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ROBO3Q96MS0 1386 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 TCRBV7S2A1N4TA0A589 114 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 GTPBP10A4D1E9 387 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 RASA4BC9J798 803 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 GSC2O15499 205 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 RASA4O43374 803 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 THAP12O43422 761 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ZWINTO95229 277 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ITIH2P19823 946 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 KCNJ1P48048 391 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 USP46P62068 366 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 TFAP4Q01664 338 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 SPARCL1Q14515 664 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 SIX1Q15475 284 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 DBN1Q16643 649 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 SBK1Q52WX2 424 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 DCAF17Q5H9S7 520 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 DAB2IPQ5VWQ8 1189 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 NLRP9Q7RTR0 991 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 RHOT2Q8IXI1 618 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 REXO1Q8N1G1 1221 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 DENND1AQ8TEH3 1009 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 STMN2Q93045 179 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 FAM163AQ96GL9 167 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 HIC2Q96JB3 615 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 OLFM3Q96PB7 478 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 TUBGCP5Q96RT8 1024 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 LZTS2Q9BRK4 669 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 CIDEBQ9UHD4 219 aa8.56□□□□□ -1.04
HMGXB4-202ENST00000418170 ATP6V1G1O75348 118 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 DESP17661 470 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 SLC18A1P54219 525 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 MYLK4Q86YV6 388 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 SMC1BQ8NDV3 1235 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF398Q8TD17 642 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 NINJ2Q9NZG7 142 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 EXOC3O60645 756 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 SPATA31D3P0C874 917 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 CCDC166P0CW27 439 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 NEK3P51956 506 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 SH2D4BQ5SQS7 431 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 SPATA31D4Q6ZUB0 917 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 SLC13A5Q86YT5 568 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 DTX3LQ8TDB6 740 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 SLC35C1Q96A29 364 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 LRRC19Q9H756 370 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 STK32BQ9NY57 414 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 BIN2Q9UBW5 565 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 ZNF646O15015 1829 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 PRPF4O43172 522 aaKnown RBP eCLIP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 TDP2O95551 362 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 PABPC4LP0CB38 370 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 CHRNB2P17787 502 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 MARK2Q7KZI7 788 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 MTDHQ86UE4 582 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 RIBC1Q8N443 379 aaPredicted RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 MAML1Q92585 1016 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 PTCD3Q96EY7 689 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 POP1Q99575 1024 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 UBN1Q9NPG3 1134 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 TAS2R14Q9NYV8 317 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 NUMBLQ9Y6R0 609 aa8.55□□□□□ -1.04
HMGXB4-202ENST00000418170 UBR3Q6ZT12 1888 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 A0A1W2PRG0 241 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 KLRF2D3W0D1 207 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 EDIL3O43854 480 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 AKAP3O75969 853 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 ASLP04424 464 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 PYGMP11217 842 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 KRT17Q04695 432 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 STAT4Q14765 748 aa8.54□□□□□ -1.04
HMGXB4-202ENST00000418170 TCERG1LQ5VWI1 586 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms