RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 LDHCP07864 332 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 TARSP26639 723 aaKnown RBP8.41□□□□□ -1.06
VRK2-203ENST00000417641 GCAP28676 217 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 ALDH3A1P30838 453 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 BTDP43251 543 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 SIK1P57059 783 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 KRT17Q04695 432 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 GABPAQ06546 454 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 CALCOCO2Q13137 446 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 PPP1R15BQ5SWA1 713 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 RNF207Q6ZRF8 634 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 SEPT14Q6ZU15 432 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 SLFN12Q8IYM2 578 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 LRRC47Q8N1G4 583 aaKnown RBP8.41□□□□□ -1.06
VRK2-203ENST00000417641 RBBP8NLQ8NC74 664 aaPredicted RBP8.41□□□□□ -1.06
VRK2-203ENST00000417641 PHC3Q8NDX5 983 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 NUDCD1Q96RS6 583 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 PSTPIP2Q9H939 334 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 GPCPD1Q9NPB8 672 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 LNPEPQ9UIQ6 1025 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 ZNF652Q9Y2D9 606 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 C2CD2Q9Y426 696 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 KAT6BQ8WYB5 2073 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 CDK5RAP2Q96SN8 1893 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 TMEM110-MUSTN1A8MSY1 372 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 HGSO14964 777 aaPredicted RBP8.4□□□□□ -1.06
VRK2-203ENST00000417641 ZBTB5O15062 677 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 TBX3O15119 743 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 MAPK13O15264 365 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 EDF1O60869 148 aaKnown RBP8.4□□□□□ -1.06
VRK2-203ENST00000417641 CDH16O75309 829 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 GCNT3O95395 438 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 CYP1A2P05177 515 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 RFX1P22670 979 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 EPHB2P29323 1055 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 PCK1P35558 622 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 MXRA7P84157 204 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 KLC1Q07866 573 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 MESDQ14696 234 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 COG2Q14746 738 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 TNIP1Q15025 636 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 CTC1Q2NKJ3 1217 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 GNPTABQ3T906 1256 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 Q4G0T1 1027 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 TMEM154Q6P9G4 183 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 FAM47EQ6ZV65 393 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 SYDE1Q6ZW31 735 aaPredicted RBP8.4□□□□□ -1.06
VRK2-203ENST00000417641 INTS8Q75QN2 995 aaKnown RBP8.4□□□□□ -1.06
VRK2-203ENST00000417641 ANO3Q9BYT9 981 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 CPSF2Q9P2I0 782 aaKnown RBP8.4□□□□□ -1.06
VRK2-203ENST00000417641 GRID1Q9ULK0 1009 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 PHTF1Q9UMS5 762 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 NUMBLQ9Y6R0 609 aa8.4□□□□□ -1.06
VRK2-203ENST00000417641 FAM170AA1A519 330 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L15C9J2P7 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L10C9JJH3 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L11C9JVI0 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L18D6R9N7 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L22D6RA61 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L19D6RCP7 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L20D6RJB6 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 IRF6O14896 467 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 SMIM24O75264 130 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 GAP43P17677 238 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 PTPN4P29074 926 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 NMT1P30419 496 aaKnown RBP8.4□□□□□ -1.07
VRK2-203ENST00000417641 ITGA8P53708 1063 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 IL9RQ01113 521 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 OCRLQ01968 901 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 CAV1Q03135 178 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L24Q0WX57 530 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 SETDB1Q15047 1291 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 CCDC142Q17RM4 750 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 USP17L6PQ6QN14 398 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 SLC51AQ86UW1 340 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 TRABD2AQ86V40 505 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 VSIG1Q86XK7 387 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 FBXO41Q8TF61 875 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 NRG4Q8WWG1 115 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 SPOCK2Q92563 424 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 SNF8Q96H20 258 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 PWWP2AQ96N64 755 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 LRRC37BQ96QE4 947 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 MIPEPQ99797 713 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 HERPUD2Q9BSE4 406 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 DCLRE1BQ9H816 532 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.4□□□□□ -1.07
VRK2-203ENST00000417641 NMRK1Q9NWW6 199 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 NKIRAS1Q9NYS0 192 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 CHORDC1Q9UHD1 332 aaPredicted RBP8.4□□□□□ -1.07
VRK2-203ENST00000417641 NOCTQ9UK39 431 aaKnown RBP8.4□□□□□ -1.07
VRK2-203ENST00000417641 VAV3Q9UKW4 847 aa8.4□□□□□ -1.07
VRK2-203ENST00000417641 FAM47DPA6NHR8 397 aa8.39□□□□□ -1.07
VRK2-203ENST00000417641 RGL2O15211 777 aa8.39□□□□□ -1.07
VRK2-203ENST00000417641 PRPF4O43172 522 aaKnown RBP eCLIP8.39□□□□□ -1.07
VRK2-203ENST00000417641 ENTPD5O75356 428 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms