RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 ZFHX4Q86UP3 3567 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 LAMA2P24043 3122 aaKnown RBP3.51□□□□□ -1.85
LINC00428-201ENST00000415620 TRIOBPQ9H2D6 2365 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 TOGARAM1Q9Y4F4 1720 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 CCDC66A2RUB6 948 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 PRAMEF22A3QJZ6 481 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 GOLGA6L22H0YM25 854 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 GSTA4O15217 222 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 MFAP3LO75121 409 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 NAT1P18440 290 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 SESN2P58004 480 aaPredicted RBP3.51□□□□□ -1.85
LINC00428-201ENST00000415620 MAP2K1Q02750 393 aaPredicted RBP3.51□□□□□ -1.85
LINC00428-201ENST00000415620 ACAP1Q15027 740 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 GAGE13Q4V321 117 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 NAIF1Q69YI7 327 aaPredicted RBP3.51□□□□□ -1.85
LINC00428-201ENST00000415620 MICALCLQ6ZW33 695 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 ANKS3Q6ZW76 656 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 HDGFL2Q7Z4V5 671 aaPredicted RBP3.51□□□□□ -1.85
LINC00428-201ENST00000415620 NKD2Q969F2 451 aaPredicted RBP3.51□□□□□ -1.85
LINC00428-201ENST00000415620 FOXRED1Q96CU9 486 aaPredicted RBP3.51□□□□□ -1.85
LINC00428-201ENST00000415620 GBP4Q96PP9 640 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 MNTQ99583 582 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 TINF2Q9BSI4 451 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 SPATA9Q9BWV2 254 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 PRDM11Q9NQV5 511 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 KCNH7Q9NS40 1196 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 B3GALT1Q9Y5Z6 326 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 PRUNE2Q8WUY3 3088 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 PAPPA2Q9BXP8 1791 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 SCN11AQ9UI33 1791 aa3.51□□□□□ -1.85
LINC00428-201ENST00000415620 E9PCH4 1651 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 C5P01031 1676 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 NRXN1Q9ULB1 1477 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 GOLGA8BA8MQT2 603 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 FOXP2O15409 715 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 H2AFYO75367 372 aaKnown RBP3.5□□□□□ -1.85
LINC00428-201ENST00000415620 GUCY1A3Q02108 690 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 ALDH6A1Q02252 535 aaKnown RBP3.5□□□□□ -1.85
LINC00428-201ENST00000415620 MAP3K12Q12852 859 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 TIGD2Q4W5G0 525 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 FAM47CQ5HY64 1035 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
LINC00428-201ENST00000415620 LRRC55Q6ZSA7 311 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 RTN4RL1Q86UN2 441 aaPredicted RBP3.5□□□□□ -1.85
LINC00428-201ENST00000415620 TCP11L2Q8N4U5 519 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 CALML6Q8TD86 181 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 NELL1Q92832 810 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 GFM2Q969S9 779 aaKnown RBP3.5□□□□□ -1.85
LINC00428-201ENST00000415620 MSRB2Q9Y3D2 182 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 CENPFP49454 3210 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 BCL9O00512 1426 aa3.5□□□□□ -1.85
LINC00428-201ENST00000415620 PASKQ96RG2 1323 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 RBBP6Q7Z6E9 1792 aaKnown RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 UBE2QL1A1L167 161 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 SCDO00767 359 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 SRGAP2CP0DJJ0 459 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 VEGFAP15692 232 aaPredicted RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 ZFP36P26651 326 aaKnown RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 CTGFP29279 349 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 USP14P54578 494 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 BPIFB4P59827 614 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 SUMO1P63165 101 aaKnown RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 GABREP78334 506 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 ARID5AQ03989 594 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 GNL2Q13823 731 aaKnown RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 CATSPEREQ5SY80 951 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 FKBP15Q5T1M5 1219 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 FOXB2Q5VYV0 432 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 MFSD5Q6N075 450 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 ANKRD53Q8N9V6 530 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 HIPK4Q8NE63 616 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 MDGA1Q8NFP4 955 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 ATXN2LQ8WWM7 1075 aaKnown RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 GCDHQ92947 438 aaPredicted RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 PGBD4Q96DM1 585 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 RPL10LQ96L21 214 aaKnown RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 FOXB1Q99853 325 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 TCF25Q9BQ70 676 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 TFCP2L1Q9NZI6 479 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 RNF181Q9P0P0 153 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 R3HCC1Q9Y3T6 440 aaKnown RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 PCDHA9Q9Y5H5 950 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 BRD4O60885 1362 aaPredicted RBP3.49□□□□□ -1.85
LINC00428-201ENST00000415620 TAF1LQ8IZX4 1826 aa3.49□□□□□ -1.85
LINC00428-201ENST00000415620 PPLO60437 1756 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 COL5A2P05997 1499 aaPredicted RBP3.48□□□□□ -1.85
LINC00428-201ENST00000415620 CASKIN1Q8WXD9 1431 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 TRBV23-1A0A0A0MS06 115 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 IPO13O94829 963 aaKnown RBP3.48□□□□□ -1.85
LINC00428-201ENST00000415620 ERCC5P28715 1186 aaPredicted RBP3.48□□□□□ -1.85
LINC00428-201ENST00000415620 CLK3P49761 638 aaKnown RBP3.48□□□□□ -1.85
LINC00428-201ENST00000415620 ANTXR2P58335 489 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 RAB33AQ14088 237 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 DDB1Q16531 1140 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 NBPF6Q5VWK0 638 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 SMIM5Q71RC9 77 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 SPATC1Q76KD6 591 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 COL23A1Q86Y22 540 aaPredicted RBP3.48□□□□□ -1.85
LINC00428-201ENST00000415620 BEND2Q8NDZ0 799 aa3.48□□□□□ -1.85
LINC00428-201ENST00000415620 SUPT20HQ8NEM7 779 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms