RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 LIG1P18858 919 aa22.53■■□□□ 1.2
PTPRU-203ENST00000415600 DCAF4L1Q3SXM0 396 aa22.53■■□□□ 1.2
PTPRU-203ENST00000415600 KCTD17Q8N5Z5 321 aa22.53■■□□□ 1.2
PTPRU-203ENST00000415600 VN1R3Q9BXE9 311 aa22.53■■□□□ 1.2
PTPRU-203ENST00000415600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.53■■□□□ 1.2
PTPRU-203ENST00000415600 KCNG1Q9UIX4 513 aa22.53■■□□□ 1.2
PTPRU-203ENST00000415600 PCDHB6Q9Y5E3 794 aa22.53■■□□□ 1.2
PTPRU-203ENST00000415600 C2CD2LO14523 706 aa22.52■■□□□ 1.2
PTPRU-203ENST00000415600 CNPP09543 421 aaKnown RBP22.52■■□□□ 1.2
PTPRU-203ENST00000415600 CDR2LQ86X02 465 aaPredicted RBP22.52■■□□□ 1.2
PTPRU-203ENST00000415600 GPR65Q8IYL9 337 aa22.52■■□□□ 1.2
PTPRU-203ENST00000415600 PLCD3Q8N3E9 789 aa22.52■■□□□ 1.2
PTPRU-203ENST00000415600 TDRD5Q8NAT2 981 aaKnown RBP22.52■■□□□ 1.2
PTPRU-203ENST00000415600 DRC1Q96MC2 740 aa22.52■■□□□ 1.2
PTPRU-203ENST00000415600 TADA2AO75478 443 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 TOB1P50616 345 aaPredicted RBP22.51■■□□□ 1.19
PTPRU-203ENST00000415600 CLCN4P51793 760 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 SIGLEC14Q08ET2 396 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 DMP1Q13316 513 aaPredicted RBP22.51■■□□□ 1.19
PTPRU-203ENST00000415600 PTPN21Q16825 1174 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 USP41Q3LFD5 358 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 BMP8AQ7Z5Y6 402 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 SUGP1Q8IWZ8 645 aaKnown RBP22.51■■□□□ 1.19
PTPRU-203ENST00000415600 ACSF2Q96CM8 615 aaPredicted RBP22.51■■□□□ 1.19
PTPRU-203ENST00000415600 POMKQ9H5K3 350 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 PDZD7Q9H5P4 517 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 MARCH5Q9NX47 278 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 KLK14Q9P0G3 267 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 USTQ9Y2C2 406 aa22.51■■□□□ 1.19
PTPRU-203ENST00000415600 TMEM221A6NGB7 291 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 K7ERI5 159 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 M0R296 226 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 GLUD1P00367 558 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 C1RP00736 705 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 TUSC3Q13454 348 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 HFE2Q6ZVN8 426 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 BSNDQ8WZ55 320 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 PBXIP1Q96AQ6 731 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 TIPINQ9BVW5 301 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 C17orf75Q9HAS0 396 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.5■■□□□ 1.19
PTPRU-203ENST00000415600 ADAM28Q9UKQ2 775 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 SF3B1O75533 1304 aaKnown RBP eCLIP22.5■■□□□ 1.19
PTPRU-203ENST00000415600 LILRB3O75022 631 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 THP07101 528 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 DSG1Q02413 1049 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 FUT10Q6P4F1 479 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 TMC5Q6UXY8 1006 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 CYP26C1Q6V0L0 522 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 C15orf39Q6ZRI6 1047 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 UBALD2Q8IYN6 164 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 C12orf76Q8N812 135 aaPredicted RBP22.5■■□□□ 1.19
PTPRU-203ENST00000415600 CDK5RAP3Q96JB5 506 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 SCAND2PQ9GZW5 306 aaPredicted RBP22.5■■□□□ 1.19
PTPRU-203ENST00000415600 CCDC113Q9H0I3 377 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 NT5C3AQ9H0P0 336 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 MIOSQ9NXC5 875 aa22.5■■□□□ 1.19
PTPRU-203ENST00000415600 CCDC169A6NNP5 214 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 SP100P23497 879 aaPredicted RBP22.49■■□□□ 1.19
PTPRU-203ENST00000415600 UBE2HP62256 183 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 ELAVL2Q12926 359 aaKnown RBP22.49■■□□□ 1.19
PTPRU-203ENST00000415600 MTMR3Q13615 1198 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 HSP90AA2PQ14568 343 aaPredicted RBP22.49■■□□□ 1.19
PTPRU-203ENST00000415600 ECM1Q16610 540 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 FAM173BQ6P4H8 233 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 CCDC149Q6ZUS6 474 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 GPR149Q86SP6 731 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 HDAC7Q8WUI4 952 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 RXFP1Q9HBX9 757 aa22.49■■□□□ 1.19
PTPRU-203ENST00000415600 TDRD15B5MCY1 1934 aaKnown RBP22.48■■□□□ 1.19
PTPRU-203ENST00000415600 MUC6Q6W4X9 2439 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 GADD45BO75293 160 aaPredicted RBP22.48■■□□□ 1.19
PTPRU-203ENST00000415600 ATF7IP2Q5U623 682 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 KIAA0319Q5VV43 1072 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 OTOP3Q7RTS5 596 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 RNF168Q8IYW5 571 aaPredicted RBP22.48■■□□□ 1.19
PTPRU-203ENST00000415600 GSTCDQ8NEC7 633 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 PRRX2Q99811 253 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 MAN1C1Q9NR34 630 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 SNTG2Q9NY99 539 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 SORCS3Q9UPU3 1222 aa22.48■■□□□ 1.19
PTPRU-203ENST00000415600 TEX28O15482 410 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 RECQL4O94761 1208 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 ATP2C1P98194 919 aaPredicted RBP22.47■■□□□ 1.19
PTPRU-203ENST00000415600 ZRSR1Q15695 479 aaKnown RBP22.47■■□□□ 1.19
PTPRU-203ENST00000415600 ARL6IP4Q66PJ3 421 aaKnown RBP22.47■■□□□ 1.19
PTPRU-203ENST00000415600 ATL3Q6DD88 541 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 CAVIN1Q6NZI2 390 aaKnown RBP22.47■■□□□ 1.19
PTPRU-203ENST00000415600 PDXDC1Q6P996 788 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 ZDHHC14Q8IZN3 488 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 CMASQ8NFW8 434 aaPredicted RBP22.47■■□□□ 1.19
PTPRU-203ENST00000415600 STAMQ92783 540 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 PLEKHA4Q9H4M7 779 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 CHST7Q9NS84 486 aa22.47■■□□□ 1.19
PTPRU-203ENST00000415600 C2CD4DB7Z1M9 353 aa22.46■■□□□ 1.19
PTPRU-203ENST00000415600 BMP15O95972 392 aa22.46■■□□□ 1.19
PTPRU-203ENST00000415600 SMTNP53814 917 aa22.46■■□□□ 1.19
PTPRU-203ENST00000415600 YARSP54577 528 aaKnown RBP22.46■■□□□ 1.19
PTPRU-203ENST00000415600 PEX3P56589 373 aa22.46■■□□□ 1.19
PTPRU-203ENST00000415600 KIFC3Q9BVG8 833 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms