RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ANKRD13CQ8N6S4 541 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 ACER1Q8TDN7 264 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 GJA10Q969M2 543 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 SLC35B4Q969S0 331 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 NOC4LQ9BVI4 516 aaKnown RBP8.35□□□□□ -1.07
SIK3-203ENST00000415541 AZI2Q9H6S1 392 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 NRDE2Q9H7Z3 1164 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 SPON1Q9HCB6 807 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
SIK3-203ENST00000415541 AIPL1Q9NZN9 384 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 TMEM247A6NEH6 219 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 DCDC2CA8MYV0 355 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 PGRMC1O00264 195 aaKnown RBP8.35□□□□□ -1.07
SIK3-203ENST00000415541 GAS7O60861 476 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 VAV1P15498 845 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 SLC34A1Q06495 639 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 PKN1Q16512 942 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 FAM13CQ8NE31 585 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 FAM163AQ96GL9 167 aaPredicted RBP8.35□□□□□ -1.07
SIK3-203ENST00000415541 MPP4Q96JB8 637 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 MTFR1LQ9H019 292 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 MTRF1LQ9UGC7 380 aaKnown RBP8.35□□□□□ -1.07
SIK3-203ENST00000415541 MRPL11Q9Y3B7 192 aaKnown RBP8.35□□□□□ -1.07
SIK3-203ENST00000415541 ZHX2Q9Y6X8 837 aa8.35□□□□□ -1.07
SIK3-203ENST00000415541 SHANK3Q9BYB0 1731 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 KRIT1O00522 736 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 KCNK3O14649 394 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 PALMO75781 387 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 FAM13AO94988 1023 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 FGFR1OPO95684 399 aaKnown RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 UBTFL6P0CB48 400 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 NAT1P18440 290 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 PLCG1P19174 1290 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 ECE1P42892 770 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 CD97P48960 835 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 CDK7P50613 346 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 TOB1P50616 345 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 HPCAP84074 193 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 THOC7Q6I9Y2 204 aaKnown RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 SCUBE1Q8IWY4 988 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 ZNF507Q8TCN5 953 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 CAMKK2Q96RR4 588 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 TUBGCP5Q96RT8 1024 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 OXCT2Q9BYC2 517 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 PCDHA6Q9UN73 950 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 PLAGL2Q9UPG8 496 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 TRIM33Q9UPN9 1127 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 DNM3Q9UQ16 869 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 PCDHA8Q9Y5H6 950 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 HGSO14964 777 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 DAPK3O43293 454 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 GNA14O95837 355 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 MYBP10242 640 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 STX2P32856 288 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 ARID5AQ03989 594 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 ZBTB17Q13105 803 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 DCTN2Q13561 401 aaKnown RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 C6orf163Q5TEZ5 329 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 FOXB2Q5VYV0 432 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 BTNL9Q6UXG8 535 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 GADL1Q6ZQY3 521 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 ARHGAP24Q8N264 748 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 PIP4K2CQ8TBX8 421 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 NAT14Q8WUY8 206 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 GATA6Q92908 595 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 DYDC2Q96IM9 177 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 DHRS1Q96LJ7 313 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 LRRC37BQ96QE4 947 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 TUBB6Q9BUF5 446 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 SPZ1Q9BXG8 430 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 BHMT2Q9H2M3 363 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 MYOZ2Q9NPC6 264 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 NKIRAS1Q9NYS0 192 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 RASAL2Q9UJF2 1139 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 ECM29Q5VYK3 1845 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 RPN1P04843 607 aaKnown RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 LYNP07948 512 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 NUDT17P0C025 328 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 TAL1P17542 331 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 CA8P35219 290 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 HOXD12P35452 270 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 PPP1R2P41236 205 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 PMS2P54278 862 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 SHROOM1Q2M3G4 852 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 LRRC74BQ6ZQY2 392 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 DDX42Q86XP3 938 aaKnown RBP eCLIP8.34□□□□□ -1.07
SIK3-203ENST00000415541 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 ZNF184Q99676 751 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 ANO3Q9BYT9 981 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 ASCC2Q9H1I8 757 aaPredicted RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 TMEM60Q9H2L4 133 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 METTL14Q9HCE5 456 aaKnown RBP8.34□□□□□ -1.07
SIK3-203ENST00000415541 KCNK9Q9NPC2 374 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 SH3GLB2Q9NR46 395 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms