RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 CYP3A4P08684 503 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 KLHL38Q2WGJ6 581 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 METTL7BQ6UX53 244 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 RASGRP2Q7LDG7 609 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 FAM129AQ9BZQ8 928 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 VTA1Q9NP79 307 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 OLFML3Q9NRN5 406 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 TBX20Q9UMR3 447 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 CFAP69A5D8W1 941 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 WNT10BO00744 389 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 GFPT1Q06210 699 aaPredicted RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 EFCAB12Q6NXP0 572 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 GLB1LQ6UWU2 654 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 ADGRA1Q86SQ6 560 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 GLT1D1Q96MS3 346 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 PDCD2LQ9BRP1 358 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 UNC45AQ9H3U1 944 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 ZWILCHQ9H900 591 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 PPCSQ9HAB8 311 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 ITGA4P13612 1032 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 FKBP1BP68106 108 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 NAB2Q15742 525 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 TMEM143Q96AN5 459 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 OSBPL9Q96SU4 736 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 PARD6BQ9BYG5 372 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 NIF3L1Q9GZT8 377 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 UBQLN1Q9UMX0 589 aaKnown RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 ATP8A1Q9Y2Q0 1164 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 RIC1Q4ADV7 1423 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 TCF7P36402 384 aaPredicted RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 RECQLP46063 649 aaPredicted RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 GRB10Q13322 594 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 LAMB3Q13751 1172 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 SH2D4BQ5SQS7 431 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 PHLDB2Q86SQ0 1253 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 SYTL5Q8TDW5 730 aaPredicted RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 ZC3H15Q8WU90 426 aaKnown RBP12.72□□□□□ -0.37
PTPRF-205ENST00000414879 EXOC4Q96A65 974 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
PTPRF-205ENST00000414879 OGTO15294 1046 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 PLA2G6O60733 806 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 KRT38O76015 456 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 PAPOLAP51003 745 aaKnown RBP12.71□□□□□ -0.37
PTPRF-205ENST00000414879 C2orf54Q08AI8 447 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 WDR72Q3MJ13 1102 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 TACC3Q9Y6A5 838 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 EXOC1LA0A1B0GW35 172 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 C17orf102A2RUQ5 167 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 GTPBP10A4D1E9 387 aaKnown RBP12.71□□□□□ -0.37
PTPRF-205ENST00000414879 EPHB1P54762 984 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 SNX1Q13596 522 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 KLC3Q6P597 504 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 ARRDC4Q8NCT1 418 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 SOCS4Q8WXH5 440 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.37
PTPRF-205ENST00000414879 SPATC1LQ9H0A9 340 aa12.71□□□□□ -0.37
PTPRF-205ENST00000414879 PPP1R12AO14974 1030 aaPredicted RBP12.71□□□□□ -0.38
PTPRF-205ENST00000414879 TMEM253P0C7T8 217 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 EPAS1Q99814 870 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 VCX3BQ9H321 246 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 PPP1R3GB7ZBB8 358 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 POC1B-GALNT4F8VUJ3 575 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 CYP2B6P20813 491 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 NNMTP40261 264 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 DYNLT1P63172 113 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 PKN1Q16512 942 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 PTPROQ16827 1216 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 ZNF394Q53GI3 561 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 BTBD8Q5XKL5 378 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 GLYCTKQ8IVS8 523 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 SCG3Q8WXD2 468 aaKnown RBP12.71□□□□□ -0.38
PTPRF-205ENST00000414879 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.38
PTPRF-205ENST00000414879 GPR182O15218 404 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 GSTA1P08263 222 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 GSTA2P09210 222 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 STAG3L1P0CL83 205 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 TPD52P55327 224 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 BCAR1P56945 870 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 TSNAXIP1Q2TAA8 658 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 KIAA1755Q5JYT7 1200 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 FAM102AQ5T9C2 384 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 WDR18Q9BV38 432 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 NBPF12Q5TAG4 269 aaPredicted RBP12.7□□□□□ -0.38
PTPRF-205ENST00000414879 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 HSPH1Q92598 858 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 FAF2Q96CS3 445 aa12.7□□□□□ -0.38
PTPRF-205ENST00000414879 PPP1R12CQ9BZL4 782 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms