RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	TMEM161A	Q9NX61	479 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	ANKFY1	Q9P2R3	1169 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	EXOC7	Q9UPT5	735 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	HES2	Q9Y543	173 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	CDH23	Q9H251	3354 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	SKI	P12755	728 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	ATP2A2	P16615	1042 aa	Known RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	SNRPF	P62306	86 aa	Known RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	HTRA4	P83105	476 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	TMEM132A	Q24JP5	1023 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	CLLU1OS	Q5K130	101 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZBTB41	Q5SVQ8	909 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	PRPF38B	Q5VTL8	546 aa	Known RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	HERC6	Q8IVU3	1022 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	SYCP3	Q8IZU3	236 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	PHOSPHO2	Q8TCD6	241 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	LPP	Q93052	612 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZNF689	Q96CS4	500 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	SLC9A7	Q96T83	725 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	ADPGK	Q9BRR6	497 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	CBWD1	Q9BRT8	395 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	PDCL3	Q9H2J4	239 aa		11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	MTIF3	Q9H2K0	278 aa	Known RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	COLQ	Q9Y215	455 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNF3-205	ENST00000413658	TRANK1	O15050	2925 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	GRXCR1	A8MXD5	290 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	PDXK	O00764	312 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	OGT	O15294	1046 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	INPPL1	O15357	1258 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	DGKI	O75912	1065 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	GJB5	O95377	273 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	FGFR1	P11362	822 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	GART	P22102	1010 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	GRM5	P41594	1212 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	GATM	P50440	423 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	AFF1	P51825	1210 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	PMS1	P54277	932 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	SEZ6	Q53EL9	994 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	SLFN12L	Q6IEE8	588 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	CENPP	Q6IPU0	288 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	ALKAL1	Q6UXT8	129 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	C12orf56	Q8IXR9	622 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	POMGNT1	Q8WZA1	660 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	MED15	Q96RN5	788 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	TCHP	Q9BT92	498 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	MSTO1	Q9BUK6	570 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	TRIM6	Q9C030	488 aa	Predicted RBP	11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	CXCL16	Q9H2A7	254 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	TYW1	Q9NV66	732 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	DMAC2	Q9NW81	257 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	SNTG2	Q9NY99	539 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	CGN	Q9P2M7	1197 aa	Known RBP	11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	TRAF3IP3	Q9Y228	551 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	PCDHB7	Q9Y5E2	793 aa		11.22	□□□□□ -0.61
ZNF3-205	ENST00000413658	SZT2	Q5T011	3432 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658		A0A1W2PPC1	479 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	CLIC2	O15247	247 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	OFD1	O75665	1012 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	RECQL4	O94761	1208 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	UPP2	O95045	317 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	KIF20A	O95235	890 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	ADRB2	P07550	413 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	STAG3L1	P0CL83	205 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	HARS	P12081	509 aa	Known RBP	11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	AKAP5	P24588	427 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	TNFSF9	P41273	254 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	NLRP12	P59046	1061 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	NFIL3	Q16649	462 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	DPCR1	Q3MIW9	517 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	SLC9A9	Q8IVB4	645 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	THNSL1	Q8IYQ7	743 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	GSTCD	Q8NEC7	633 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	FBXL18	Q96ME1	805 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	CASD1	Q96PB1	797 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	PCIF1	Q9H4Z3	704 aa		11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	CPSF3	Q9UKF6	684 aa	Known RBP	11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	AGO2	Q9UKV8	859 aa	Known RBP	11.21	□□□□□ -0.61
ZNF3-205	ENST00000413658	ARL5C	A6NH57	179 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	CLTA	P09496	248 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	ITGA4	P13612	1032 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	IBSP	P21815	317 aa	Predicted RBP	11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	MATR3	P43243	847 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	RABGGTB	P53611	331 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	OSTN	P61366	133 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	ENOX2	Q16206	610 aa	Known RBP	11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	SLC10A6	Q3KNW5	377 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	XKR4	Q5GH76	650 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	ANKRD40	Q6AI12	368 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	TTI2	Q6NXR4	508 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	FAM117B	Q6P1L5	589 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	ARMCX5	Q6P1M9	558 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	HS2ST1	Q7LGA3	356 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	PDCD7	Q8N8D1	485 aa	Known RBP	11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	MLKL	Q8NB16	471 aa		11.2	□□□□□ -0.62
ZNF3-205	ENST00000413658	RNF169	Q8NCN4	708 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms