RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SNTG2Q9NY99 539 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 SPG21Q9NZD8 308 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 STK39Q9UEW8 545 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 PLAGL2Q9UPG8 496 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 LZTS1Q9Y250 596 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 HPSEQ9Y251 543 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 GDAQ9Y2T3 454 aa11.94□□□□□ -0.5
CHMP3-205ENST00000409810 ACTN4O43707 911 aaKnown RBP11.93□□□□□ -0.5
CHMP3-205ENST00000409810 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
CHMP3-205ENST00000409810 AFMP43652 599 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 SCNN1GP51170 649 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 NDUFA8P51970 172 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 MCL1Q07820 350 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 SLFN12LQ6IEE8 588 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 ZBTB33Q86T24 672 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 SPPL3Q8TCT6 385 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 POF1BQ8WVV4 589 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 CCDC47Q96A33 483 aaKnown RBP11.93□□□□□ -0.5
CHMP3-205ENST00000409810 ZFP42Q96MM3 310 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 NSUN3Q9H649 340 aaKnown RBP11.93□□□□□ -0.5
CHMP3-205ENST00000409810 ALG13Q9NP73 1137 aaKnown RBP11.93□□□□□ -0.5
CHMP3-205ENST00000409810 TLR9Q9NR96 1032 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 KLK14Q9P0G3 267 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 SERTAD1Q9UHV2 236 aa11.93□□□□□ -0.5
CHMP3-205ENST00000409810 UBE4BO95155 1302 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 PRUNE2Q8WUY3 3088 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 PVALEFA0A1B0GWK0 134 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 GRM6O15303 877 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 EIF3DO15371 548 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHMP3-205ENST00000409810 PPP1R37O75864 691 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 ALDH2P05091 517 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 THP07101 528 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 GALTP07902 379 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 POSTNQ15063 836 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-205ENST00000409810 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
CHMP3-205ENST00000409810 PDE12Q6L8Q7 609 aaKnown RBP11.92□□□□□ -0.5
CHMP3-205ENST00000409810 COLGALT2Q8IYK4 626 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 SYCP3Q8IZU3 236 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 SLC39A11Q8N1S5 342 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 PPM1EQ8WY54 764 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 ACCSQ96QU6 501 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 BLZF1Q9H2G9 400 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 TMEM206Q9H813 350 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 FAN1Q9Y2M0 1017 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-205ENST00000409810 BRWD1Q9NSI6 2320 aa11.92□□□□□ -0.5
CHMP3-205ENST00000409810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-205ENST00000409810 FSD2A1L4K1 749 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 ABLIM1O14639 778 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 DDHD2O94830 711 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 PBX3P40426 434 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 OR1G1P47890 313 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 SLC11A1P49279 550 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 OSTNP61366 133 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 DSC1Q08554 894 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 TUSC3Q13454 348 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
CHMP3-205ENST00000409810 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-205ENST00000409810 FAM26FQ5R3K3 315 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 KANK3Q6NY19 840 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 ZNF280BQ86YH2 543 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 GSTCDQ8NEC7 633 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 PAGE5Q96GU1 130 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 IGSF21Q96ID5 467 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-205ENST00000409810 SNX27Q96L92 541 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 MSTO1Q9BUK6 570 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 COLEC11Q9BWP8 271 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 EXOC1Q9NV70 894 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 ANK1P16157 1881 aa11.91□□□□□ -0.5
CHMP3-205ENST00000409810 NT5C1B-RDH14C9J2C7 533 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 OGTO15294 1046 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 NCK2O43639 380 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 ZNF202O95125 648 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 CSPG5O95196 566 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 CLTAP09496 248 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 MYBP10242 640 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 AFF1P51825 1210 aaKnown RBP11.9□□□□□ -0.5
CHMP3-205ENST00000409810 PPP2R3AQ06190 1150 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 CUL4BQ13620 913 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 KRBA2Q6ZNG9 492 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 DDX53Q86TM3 631 aaKnown RBP11.9□□□□□ -0.5
CHMP3-205ENST00000409810 CEP120Q8N960 986 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 POMGNT1Q8WZA1 660 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 TCF25Q9BQ70 676 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 STRA6Q9BX79 667 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 GOLPH3LQ9H4A5 285 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 RPF1Q9H9Y2 349 aaKnown RBP11.9□□□□□ -0.5
CHMP3-205ENST00000409810 PLEKHA5Q9HAU0 1116 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 NGRNQ9NPE2 291 aaKnown RBP11.9□□□□□ -0.5
CHMP3-205ENST00000409810 MIOSQ9NXC5 875 aa11.9□□□□□ -0.5
CHMP3-205ENST00000409810 CNTN3Q9P232 1028 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms