RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 RGL2O15211 777 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 GGPS1O95749 300 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 GH1P01241 217 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SPDYE6P0CI01 402 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 HSPA6P17066 643 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ARHGAP25P42331 645 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 FXR2P51116 673 aaKnown RBP eCLIP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TGFB2P61812 414 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TSPY1Q01534 308 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PRKCEQ02156 737 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ADCY1Q08828 1119 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TXNRD3Q86VQ6 643 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 BBS5Q8N3I7 341 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 GPATCH11Q8N954 259 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 KIF12Q96FN5 646 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CABS1Q96KC9 395 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PRMT6Q96LA8 375 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 C11orf70Q9BRQ4 267 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PARD6BQ9BYG5 372 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TRIM9Q9C026 710 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 HOMER3Q9NSC5 361 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 WDR70Q9NW82 654 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 LIMA1Q9UHB6 759 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 GOLGA8CPA6NN73 597 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PDE2AO00408 941 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 OPLAHO14841 1288 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TJP3O95049 919 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ICAM1P05362 532 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CETPP11597 493 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 MSH2P43246 934 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 AP3M2P53677 418 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 HDLBPQ00341 1268 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 DHX9Q08211 1270 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SEPT6Q14141 434 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TAF1CQ15572 869 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CYP4F22Q6NT55 531 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF746Q6NUN9 644 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 NALCNQ8IZF0 1738 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CHST13Q8NET6 341 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SLC16A10Q8TF71 515 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ATG4CQ96DT6 458 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TAAR1Q96RJ0 339 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CCSER1Q9C0I3 900 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 TMEM60Q9H2L4 133 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ZFYVE28Q9HCC9 887 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ASNSD1Q9NWL6 643 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 KCND2Q9NZV8 630 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 DNMT3BQ9UBC3 853 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 STRIP2Q9ULQ0 834 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 SYNGAP1Q96PV0 1343 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CCL15-CCL14A0A0B4J2E2 113 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 A0A1W2PQC6 194 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ZBTB24O43167 697 aaPredicted RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 RHOBTB3O94955 611 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ZBED1O96006 694 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CAP2P40123 477 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 EFNA5P52803 228 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 MRPS25P82663 173 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CCL15Q16663 113 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ATG14Q6ZNE5 492 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 LRRC8CQ8TDW0 803 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 UTP4Q969X6 686 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CFAP57Q96MR6 1250 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 DDX23Q9BUQ8 820 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 CCDC68Q9H2F9 335 aa4.04□□□□□ -1.76
RGPD4-201ENST00000408999 PIN4Q9Y237 131 aaKnown RBP4.04□□□□□ -1.76
RGPD4-201ENST00000408999 ZNF142P52746 1687 aaPredicted RBP4.03□□□□□ -1.76
RGPD4-201ENST00000408999 RIC1Q4ADV7 1423 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 MYH9P35579 1960 aaKnown RBP4.03□□□□□ -1.76
RGPD4-201ENST00000408999 TTC26A0AVF1 554 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 SIGLEC16A6NMB1 481 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 SLC25A27O95847 323 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 NR3C2P08235 984 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 RFC5P40937 340 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 NFIAQ12857 509 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 CUL1Q13616 776 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 THOC5Q13769 683 aaKnown RBP4.03□□□□□ -1.76
RGPD4-201ENST00000408999 MUM1L1Q5H9M0 696 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 FBXW10Q5XX13 1052 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 NFRKBQ6P4R8 1299 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 CACNA2D3Q8IZS8 1091 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 ADSSL1Q8N142 457 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 ELMOD1Q8N336 334 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 DNAAF3Q8N9W5 541 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 GPRC5AQ8NFJ5 357 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 RAET1EQ8TD07 263 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 SKA2Q8WVK7 121 aaPredicted RBP4.03□□□□□ -1.76
RGPD4-201ENST00000408999 FAF2Q96CS3 445 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 RBM41Q96IZ5 413 aaKnown RBP4.03□□□□□ -1.76
RGPD4-201ENST00000408999 ACAP3Q96P50 834 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 SH2D3AQ9BRG2 576 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 HEMGNQ9BXL5 484 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 SMARCAD1Q9H4L7 1026 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 KLHL14Q9P2G3 628 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 MKRN1Q9UHC7 482 aaKnown RBP4.03□□□□□ -1.76
RGPD4-201ENST00000408999 IP6K2Q9UHH9 426 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 CPSF3Q9UKF6 684 aaKnown RBP4.03□□□□□ -1.76
RGPD4-201ENST00000408999 CAPN11Q9UMQ6 739 aa4.03□□□□□ -1.76
RGPD4-201ENST00000408999 TBC1D30Q9Y2I9 924 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms