RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 NBPF20Q3BBV1 942 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 PTCRAQ6ISU1 281 aaPredicted RBP14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 RINT1Q6NUQ1 792 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 SFR1Q86XK3 245 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 BAP1Q92560 729 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 BHMT2Q9H2M3 363 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 PARVGQ9HBI0 331 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 TBC1D22BQ9NU19 505 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 RAB21Q9UL25 225 aa14.02□□□□□ -0.17
SMARCB1-203ENST00000407082 NFASCO94856 1347 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 TARSL2A2RTX5 802 aaKnown RBP14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 RBAK-RBAKDNI3L0D1 243 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 GCNT3O95395 438 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 KLK7P49862 253 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 SNRPFP62306 86 aaKnown RBP14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 AMPD2Q01433 879 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 SP4Q02446 784 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 ITIH3Q06033 890 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 ARHGAP1Q07960 439 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 ASIC2Q16515 512 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 LEXMQ3ZCV2 418 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 TDRD12Q587J7 1177 aaKnown RBP14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 CC2D1AQ6P1N0 951 aaPredicted RBP14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 METTL7BQ6UX53 244 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 GBP6Q6ZN66 633 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 HDXQ7Z353 690 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 TPH2Q8IWU9 490 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 MYCT1Q8N699 235 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 CAGE1Q8TC20 777 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 AFG1LQ8WV93 481 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 GJA10Q969M2 543 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 EMID1Q96A84 441 aaPredicted RBP14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 SPATA33Q96N06 139 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 NOX5Q96PH1 765 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 ARID3AQ99856 593 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 MTG1Q9BT17 334 aaPredicted RBP14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 LMCD1Q9NZU5 365 aa14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 PUF60Q9UHX1 559 aaKnown RBP14.01□□□□□ -0.17
SMARCB1-203ENST00000407082 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 NPHP3-ACAD11A0A0J9YXS1 232 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 ARHGEF35A5YM69 484 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 DDX39AO00148 427 aaKnown RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 NOP56O00567 594 aaKnown RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 DHX15O43143 795 aaKnown RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 DKC1O60832 514 aaKnown RBP eCLIP14□□□□□ -0.17
SMARCB1-203ENST00000407082 GFPT2O94808 682 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 SLITRK3O94933 977 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 NR3C1P04150 777 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 PNMA6AP0CW24 399 aaPredicted RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 GUCY2CP25092 1073 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 PSMC2P35998 433 aaKnown RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 PAFAH1B1P43034 410 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 CPT1AP50416 773 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 PURAQ00577 322 aaKnown RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 KCNMA1Q12791 1236 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 BFSP2Q13515 415 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 HSDL1Q3SXM5 330 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 BRDTQ58F21 947 aaPredicted RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 LRRN4CLQ8ND94 238 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 PPTC7Q8NI37 304 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 EEF2KMTQ96G04 330 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 DYDC2Q96IM9 177 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 SUGCTQ9HAC7 445 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 JPH1Q9HDC5 661 aaPredicted RBP14□□□□□ -0.17
SMARCB1-203ENST00000407082 ARHGAP20Q9P2F6 1191 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 SLC9A2Q9UBY0 812 aa14□□□□□ -0.17
SMARCB1-203ENST00000407082 A6NJR5 290 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 H3BQ06 376 aaPredicted RBP13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 DCXO43602 365 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 BAIAP3O94812 1187 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 P4HBP07237 508 aaKnown RBP13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 POLR2FP61218 127 aaKnown RBP13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 CYP4A11Q02928 519 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 KLHL30Q0D2K2 578 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 EXOC3L4Q17RC7 722 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 WDR93Q6P2C0 686 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 C1orf186Q6ZWK4 172 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 MIER3Q7Z3K6 550 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 LMBR1Q8WVP7 490 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 SPAG5Q96R06 1193 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 TGS1Q96RS0 853 aaKnown RBP13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 ZSWIM4Q9H7M6 989 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 FRMD4BQ9Y2L6 1034 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 HYOU1Q9Y4L1 999 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 TELO2Q9Y4R8 837 aa13.99□□□□□ -0.17
SMARCB1-203ENST00000407082 BTNL10A8MVZ5 291 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 EML1O00423 815 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 N4BP1O75113 896 aaKnown RBP13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 PRPF6O94906 941 aaKnown RBP13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 MMP3P08254 477 aa13.98□□□□□ -0.17
SMARCB1-203ENST00000407082 RFX1P22670 979 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms