RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TARSL2A2RTX5 802 aaKnown RBP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 RALBP11234 206 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 CDH6P55285 790 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 PDAP1Q13442 181 aaKnown RBP12.72□□□□□ -0.37
SMCR8-201ENST00000406438 NBPF20Q3BBV1 942 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 ZBED8Q8IZ13 594 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 BPIFA3Q9BQP9 254 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 UNC45AQ9H3U1 944 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 CYP4F11Q9HBI6 524 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 SNX24Q9Y343 169 aa12.72□□□□□ -0.37
SMCR8-201ENST00000406438 NCAPD2Q15021 1401 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 KCNN4O15554 427 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 TBC1D4O60343 1298 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
SMCR8-201ENST00000406438 SERPIND1P05546 499 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 ADORA2BP29275 332 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 GRAMD1AQ96CP6 724 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 ATXN7L3BQ96GX2 97 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 OLFML3Q9NRN5 406 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 AURKCQ9UQB9 309 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 INPP5AQ14642 412 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 CEP95Q96GE4 821 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 ECT2Q9H8V3 914 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 RCSD1Q6JBY9 416 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 CYFIP1Q7L576 1253 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 PALLDQ8WX93 1383 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 GGCXP38435 758 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 KCNJ6P48051 423 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 ST8SIA6P61647 398 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 CDC42EP1Q00587 391 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 DRAP1Q14919 205 aaPredicted RBP12.71□□□□□ -0.37
SMCR8-201ENST00000406438 SFR1Q86XK3 245 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 TEX9Q8N6V9 391 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF507Q8TCN5 953 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 TSPAN17Q96FV3 270 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 FAM161BQ96MY7 647 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 JPH1Q9HDC5 661 aaPredicted RBP12.71□□□□□ -0.37
SMCR8-201ENST00000406438 ZFATQ9P243 1243 aa12.71□□□□□ -0.37
SMCR8-201ENST00000406438 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
SMCR8-201ENST00000406438 AFDNP55196 1824 aaKnown RBP12.71□□□□□ -0.37
SMCR8-201ENST00000406438 POTEB3A0JP26 581 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 HMGB3O15347 200 aaKnown RBP12.71□□□□□ -0.38
SMCR8-201ENST00000406438 ECE2O60344 883 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 MCAMP43121 646 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 ARSEP51690 589 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 RESTQ13127 1097 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 POTEBQ6S5H4 581 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 SARM1Q6SZW1 724 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.38
SMCR8-201ENST00000406438 LRRC53A6NM62 1247 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 A8MXQ7 604 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 PPP1R36Q96LQ0 422 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 PKD2L2Q9NZM6 624 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 POTEFA5A3E0 1075 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 ORC4O43929 436 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 GUCA1CO95843 209 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 POTEIP0CG38 1075 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 IMPDH2P12268 514 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 CDH2P19022 906 aaPredicted RBP12.71□□□□□ -0.38
SMCR8-201ENST00000406438 POTEGQ6S5H5 508 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 ADGRF4Q8IZF3 695 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 PGBD3Q8N328 593 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 GPD1LQ8N335 351 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.38
SMCR8-201ENST00000406438 USP6P35125 1406 aa12.71□□□□□ -0.38
SMCR8-201ENST00000406438 CHUKO15111 745 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 TNIP2Q8NFZ5 429 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 RAET1EQ8TD07 263 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 PRR23D1E9PI22 279 aaPredicted RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 PRR23D2P0DMB1 279 aaPredicted RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 ADNPQ9H2P0 1102 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 TADA2AO75478 443 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 PPP3CCP48454 512 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 LRRC74AQ0VAA2 488 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 SEMA3FQ13275 785 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DHX34Q14147 1143 aaKnown RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DNAJC7Q99615 494 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 C11orf70Q9BRQ4 267 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 MRGBPQ9NV56 204 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 ARHGAP31Q2M1Z3 1444 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 CFAP73A6NFT4 308 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 GOLGA8TH3BQL2 631 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 HAUS5O94927 633 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 MAGEA9P43362 315 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 ARFIP2P53365 341 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 CENPPQ6IPU0 288 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 RUBCNQ92622 972 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 MRPL1Q9BYD6 325 aaKnown RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 A0A1B0GW55 424 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 KRT14P02533 472 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms