RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 SLC26A4O43511 780 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 GLUD2P49448 558 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 ITIH3Q06033 890 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 TUSC3Q13454 348 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 TMEM119Q4V9L6 283 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 KANK3Q6NY19 840 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 RASSF8Q8NHQ8 419 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 SNX27Q96L92 541 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 ACO2Q99798 780 aaKnown RBP14.63□□□□□ -0.07
SDF4-203ENST00000403997 MRPL4Q9BYD3 311 aaKnown RBP14.63□□□□□ -0.07
SDF4-203ENST00000403997 GPR62Q9BZJ7 368 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 ARHGAP28Q9P2N2 729 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 CACNG4Q9UBN1 327 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 DAXXQ9UER7 740 aaPredicted RBP14.63□□□□□ -0.07
SDF4-203ENST00000403997 MUTYHQ9UIF7 546 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 KCNG1Q9UIX4 513 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 TNFSF13BQ9Y275 285 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 PHLPP2Q6ZVD8 1323 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 NPHP3-ACAD11A0A0J9YXS1 232 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 CASTOR2A6NHX0 329 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 PTGESO14684 152 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 WEE2P0C1S8 567 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 PLS3P13797 630 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 SYT1P21579 422 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 LONP1P36776 959 aaKnown RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 CLCN4P51793 760 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 SMTNP53814 917 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 GRIN1Q05586 938 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 STRN3Q13033 797 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 DHX8Q14562 1220 aaKnown RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 HSP90AA2PQ14568 343 aaPredicted RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 KIAA0319Q5VV43 1072 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 FUT10Q6P4F1 479 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 TAS1R3Q7RTX0 852 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 ZBTB33Q86T24 672 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 RNF168Q8IYW5 571 aaPredicted RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 INTS4Q96HW7 963 aaKnown RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 FBXL18Q96ME1 805 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 PAAF1Q9BRP4 392 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 NTPCRQ9BSD7 190 aaKnown RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 TARS2Q9BW92 718 aaKnown RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 CXCL16Q9H2A7 254 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 C11orf16Q9NQ32 467 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 TSHZ2Q9NRE2 1034 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 KCND2Q9NZV8 630 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 CDH22Q9UJ99 828 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 ADAM28Q9UKQ2 775 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 CLIC4Q9Y696 253 aa14.62□□□□□ -0.07
SDF4-203ENST00000403997 TDRD15B5MCY1 1934 aaKnown RBP14.62□□□□□ -0.07
SDF4-203ENST00000403997 K7ELQ4 463 aaPredicted RBP14.61□□□□□ -0.07
SDF4-203ENST00000403997 TEX28O15482 410 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 EFEMP2O95967 443 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 ADH1AP07327 375 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 SP100P23497 879 aaPredicted RBP14.61□□□□□ -0.07
SDF4-203ENST00000403997 MTHFRP42898 656 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 OSTNP61366 133 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 DSG1Q02413 1049 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
SDF4-203ENST00000403997 USP41Q3LFD5 358 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 ZNF568Q3ZCX4 644 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 ARSHQ5FYA8 562 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 HERC4Q5GLZ8 1057 aaPredicted RBP14.61□□□□□ -0.07
SDF4-203ENST00000403997 ATAT1Q5SQI0 421 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 GPBP1Q86WP2 473 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 HASPINQ8TF76 798 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 SPIRE2Q8WWL2 714 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 B3GALT6Q96L58 329 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 RIPOR3Q96MK2 946 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 NECTIN4Q96NY8 510 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 CCDC94Q9BW85 323 aaPredicted RBP14.61□□□□□ -0.07
SDF4-203ENST00000403997 CDT1Q9H211 546 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 CHST7Q9NS84 486 aa14.61□□□□□ -0.07
SDF4-203ENST00000403997 PLCG1P19174 1290 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 MARCKSP29966 332 aaPredicted RBP14.6□□□□□ -0.07
SDF4-203ENST00000403997 GRM5P41594 1212 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 YARSP54577 528 aaKnown RBP14.6□□□□□ -0.07
SDF4-203ENST00000403997 CEBPZQ03701 1054 aaKnown RBP14.6□□□□□ -0.07
SDF4-203ENST00000403997 RESTQ13127 1097 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 MCM6Q14566 821 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 KARSQ15046 597 aaKnown RBP14.6□□□□□ -0.07
SDF4-203ENST00000403997 GLRA4Q5JXX5 417 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 TMC5Q6UXY8 1006 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 TMEM161BQ8NDZ6 487 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 RIN2Q8WYP3 895 aaPredicted RBP14.6□□□□□ -0.07
SDF4-203ENST00000403997 POMKQ9H5K3 350 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 SFXN1Q9H9B4 322 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 RXFP1Q9HBX9 757 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 PTPRHQ9HD43 1115 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 LARSQ9P2J5 1176 aaKnown RBP14.6□□□□□ -0.07
SDF4-203ENST00000403997 NR2E1Q9Y466 385 aa14.6□□□□□ -0.07
SDF4-203ENST00000403997 SF3B1O75533 1304 aaKnown RBP eCLIP14.6□□□□□ -0.072e-7■■■■■ 85.3
SDF4-203ENST00000403997 PRR33A8MZF0 331 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 GLUD1P00367 558 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 MYBP10242 640 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 MAPTP10636 758 aaKnown RBP14.59□□□□□ -0.07
SDF4-203ENST00000403997 MCF2P10911 925 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 HARSP12081 509 aaKnown RBP14.59□□□□□ -0.07
SDF4-203ENST00000403997 PTPAQ15257 358 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms