RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 DTNBO60941 627 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 REC8O95072 547 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 NPTXRO95502 500 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 STARD6P59095 220 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 NTHL1P78549 312 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 CREMQ03060 361 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 GRIK3Q13003 919 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 SNW1Q13573 536 aaKnown RBP16.17■□□□□ 0.18
VAMP1-203ENST00000400911 EARS2Q5JPH6 523 aaKnown RBP16.17■□□□□ 0.18
VAMP1-203ENST00000400911 MAML2Q8IZL2 1156 aaPredicted RBP16.17■□□□□ 0.18
VAMP1-203ENST00000400911 RUBCNQ92622 972 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 SHDQ96IW2 340 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 EIF2AK1Q9BQI3 630 aaKnown RBP16.17■□□□□ 0.18
VAMP1-203ENST00000400911 CDH7Q9ULB5 785 aa16.17■□□□□ 0.18
VAMP1-203ENST00000400911 ZFP37Q9Y6Q3 630 aaPredicted RBP16.17■□□□□ 0.18
VAMP1-203ENST00000400911 A0A087WWV3 80 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 A0A1B0GUA9 196 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 BAG4O95429 457 aaKnown RBP16.16■□□□□ 0.18
VAMP1-203ENST00000400911 GLRA2P23416 452 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 HSP90AA2PQ14568 343 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-203ENST00000400911 SLC27A1Q6PCB7 646 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 CEP57Q86XR8 500 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 SLFN12Q8IYM2 578 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 HASPINQ8TF76 798 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 NAP1L4Q99733 375 aaKnown RBP16.16■□□□□ 0.18
VAMP1-203ENST00000400911 HSD17B14Q9BPX1 270 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 CLSTN3Q9BQT9 956 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 NFKBIZQ9BYH8 718 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 FBXW11Q9UKB1 542 aa16.16■□□□□ 0.18
VAMP1-203ENST00000400911 SF3B1O75533 1304 aaKnown RBP eCLIP16.16■□□□□ 0.18
VAMP1-203ENST00000400911 KANSL1LA0AUZ9 987 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 CASTOR2A6NHX0 329 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 CCL16O15467 120 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 DGAT1O75907 488 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 PUM1Q14671 1186 aaKnown RBP eCLIP16.15■□□□□ 0.18
VAMP1-203ENST00000400911 FAM171A1Q5VUB5 890 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 LNX1Q8TBB1 728 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-203ENST00000400911 FGF13Q92913 245 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 TTPALQ9BTX7 342 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 ANKEF1Q9NU02 776 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 POLIQ9UNA4 740 aa16.15■□□□□ 0.18
VAMP1-203ENST00000400911 MTF2Q9Y483 593 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-203ENST00000400911 EP300Q09472 2414 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-203ENST00000400911 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 ADAM12O43184 909 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 LYPLA2O95372 231 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 C8AP07357 584 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 HNRNPA1P09651 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
VAMP1-203ENST00000400911 XBP1P17861 261 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 SCRN1Q12765 414 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 SLC44A4Q53GD3 710 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 PPM1LQ5SGD2 360 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 LIN9Q5TKA1 542 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 MAEAQ7L5Y9 396 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 SUMF1Q8NBK3 374 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 ITFG1Q8TB96 612 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 PIGOQ8TEQ8 1089 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-203ENST00000400911 PDRG1Q9NUG6 133 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 SPATA6Q9NWH7 488 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-203ENST00000400911 PCDHA12Q9UN75 941 aa16.14■□□□□ 0.17
VAMP1-203ENST00000400911 KINO60870 393 aaKnown RBP16.13■□□□□ 0.17
VAMP1-203ENST00000400911 CDKL5O76039 1030 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 KIF4AO95239 1232 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 NR5A1Q13285 461 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 TUSC3Q13454 348 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 UBXN2BQ14CS0 331 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 MLF2Q15773 248 aaPredicted RBP16.13■□□□□ 0.17
VAMP1-203ENST00000400911 PSMD5Q16401 504 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 PIK3R5Q8WYR1 880 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
VAMP1-203ENST00000400911 DDX23Q9BUQ8 820 aaKnown RBP16.13■□□□□ 0.17
VAMP1-203ENST00000400911 BCO2Q9BYV7 579 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 CXCL16Q9H2A7 254 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 GPRC5CQ9NQ84 441 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 DLL3Q9NYJ7 618 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 CACNA1AO00555 2505 aa16.13■□□□□ 0.17
VAMP1-203ENST00000400911 LRRIQ4A6NIV6 560 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 FAM170BA6NMN3 283 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 TTLL13PA6NNM8 815 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 LAMTOR5O43504 91 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 XYLBO75191 536 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 CD72P21854 359 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 RARRES1P49788 294 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 PRKCQQ04759 706 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 CSTF1Q05048 431 aaKnown RBP16.12■□□□□ 0.17
VAMP1-203ENST00000400911 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
VAMP1-203ENST00000400911 MTSS1LQ765P7 747 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 SLC7A14Q8TBB6 771 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 HCFC1R1Q9NWW0 138 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 SNTG2Q9NY99 539 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 C2orf16Q68DN1 1984 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 ZMYM2Q9UBW7 1377 aa16.12■□□□□ 0.17
VAMP1-203ENST00000400911 PTGESO14684 152 aa16.11■□□□□ 0.17
VAMP1-203ENST00000400911 USO1O60763 962 aaKnown RBP16.11■□□□□ 0.17
VAMP1-203ENST00000400911 THP07101 528 aa16.11■□□□□ 0.17
VAMP1-203ENST00000400911 HOXA9P31269 272 aa16.11■□□□□ 0.17
VAMP1-203ENST00000400911 CALCRLQ16602 461 aa16.11■□□□□ 0.17
VAMP1-203ENST00000400911 RSPO4Q2I0M5 234 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms