RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 LARGE1O95461 756 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 DCNP07585 359 aaKnown RBP13.23□□□□□ -0.29
LINC00544-201ENST00000400540 LAMP2P13473 410 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
LINC00544-201ENST00000400540 RFX1P22670 979 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 KRT2P35908 639 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 NTHL1P78549 312 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 GRIK3Q13003 919 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 HTR4Q13639 388 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 CALCRLQ16602 461 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 USP41Q3LFD5 358 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 ELMSAN1Q6PJG2 1045 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 MAEAQ7L5Y9 396 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 HDAC7Q8WUI4 952 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 PRKD2Q9BZL6 878 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 PLEKHA4Q9H4M7 779 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 ANKEF1Q9NU02 776 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 ZDHHC7Q9NXF8 308 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 FNIP2Q9P278 1114 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
LINC00544-201ENST00000400540 NUMBLQ9Y6R0 609 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 R4GN57 208 aa13.23□□□□□ -0.29
LINC00544-201ENST00000400540 A0A1B0GUA9 196 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 CASTOR2A6NHX0 329 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 POTEMA6NI47 508 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 KIF4AO95239 1232 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 TXKP42681 527 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 NCBP1Q09161 790 aaKnown RBP13.22□□□□□ -0.29
LINC00544-201ENST00000400540 HSP90AA2PQ14568 343 aaPredicted RBP13.22□□□□□ -0.29
LINC00544-201ENST00000400540 HACE1Q8IYU2 909 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
LINC00544-201ENST00000400540 RPP25Q9BUL9 199 aaKnown RBP13.22□□□□□ -0.29
LINC00544-201ENST00000400540 NFKBIZQ9BYH8 718 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 TTC12Q9H892 705 aaPredicted RBP13.22□□□□□ -0.29
LINC00544-201ENST00000400540 ARHGEF3Q9NR81 526 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00544-201ENST00000400540 DLGAP2Q9P1A6 1054 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 USP20Q9Y2K6 914 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 CITO14578 2027 aa13.22□□□□□ -0.29
LINC00544-201ENST00000400540 ZMYM2Q9UBW7 1377 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 SF3B1O75533 1304 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00544-201ENST00000400540 LRRIQ4A6NIV6 560 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 ANHXE9PGG2 379 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 PTGESO14684 152 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 ADAM12O43184 909 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 LRRN2O75325 713 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 TADA2AO75478 443 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 ZMYND10O75800 440 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 EDN1P05305 212 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 ID4P47928 161 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 GRASPQ7Z6J2 395 aaPredicted RBP13.21□□□□□ -0.29
LINC00544-201ENST00000400540 FGF14Q92915 247 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 CLSTN3Q9BQT9 956 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 FOXQ1Q9C009 403 aa13.21□□□□□ -0.29
LINC00544-201ENST00000400540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00544-201ENST00000400540 COL4A2P08572 1712 aa13.21□□□□□ -0.3
LINC00544-201ENST00000400540 EP300Q09472 2414 aaPredicted RBP13.2□□□□□ -0.3
LINC00544-201ENST00000400540 MYH11P35749 1972 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 TICRRQ7Z2Z1 1910 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 BTBD18B2RXH4 712 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 NEMFO60524 1076 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 GLULP15104 373 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 FSHRP23945 695 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 IGFBP6P24592 240 aaPredicted RBP13.2□□□□□ -0.3
LINC00544-201ENST00000400540 FOXK2Q01167 660 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 TUSC3Q13454 348 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 NAB2Q15742 525 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 PSMD5Q16401 504 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 FAM171A1Q5VUB5 890 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 CDCA2Q69YH5 1023 aaPredicted RBP13.2□□□□□ -0.3
LINC00544-201ENST00000400540 PARM1Q6UWI2 310 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 CEP57Q86XR8 500 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
LINC00544-201ENST00000400540 KCNG4Q8TDN1 519 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 NXPE3Q969Y0 559 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 MTMR9Q96QG7 549 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 SNTG2Q9NY99 539 aa13.2□□□□□ -0.3
LINC00544-201ENST00000400540 CCL16O15467 120 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 JAK2O60674 1132 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 MED24O75448 989 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 RECQL4O94761 1208 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 C1RP00736 705 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
LINC00544-201ENST00000400540 C8AP07357 584 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 SPATA31C1P0DKV0 1188 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 GPC5P78333 572 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 CREMQ03060 361 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 ME3Q16798 604 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 PHLDB3Q6NSJ2 640 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 DCLRE1AQ6PJP8 1040 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
LINC00544-201ENST00000400540 DIS3L2Q8IYB7 885 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms