RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NT5DC3Q86UY8 548 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 FBXL13Q8NEE6 735 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 EPS8L1Q8TE68 723 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 SLC7A3Q8WY07 619 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 TATDN2Q93075 761 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 PCDHB18PQ96TA0 734 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 TMEM8AQ9HCN3 771 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 NMRK2Q9NPI5 230 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 VPS18Q9P253 973 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 FBXO40Q9UH90 709 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 INTUQ9ULD6 942 aa12.68□□□□□ -0.38
COL25A1-202ENST00000399127 CENPFP49454 3210 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 A0A0A6YYK5 440 aaPredicted RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 HEXIM1O94992 359 aaKnown RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 HARSP12081 509 aaKnown RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 NLRP11P59045 1033 aaKnown RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 GUCY2DQ02846 1103 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 SNAPC2Q13487 334 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 PRPF4BQ13523 1007 aaKnown RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 Q3C1V9 767 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 ZBTB41Q5SVQ8 909 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 SND1Q7KZF4 910 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 SLFN11Q7Z7L1 901 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 RAB20Q9NX57 234 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 RNF14Q9UBS8 474 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 CNMDO75829 334 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 ATG7O95352 703 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 ARIH2O95376 493 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 EDN1P05305 212 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 MMEP08473 750 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 CHRNB2P17787 502 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 TCF7P36402 384 aaPredicted RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 MAGEA9P43362 315 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 STRN3Q13033 797 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 FAM71AQ8IYT1 594 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 AENQ8WTP8 325 aaKnown RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 PLCD4Q9BRC7 762 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 HAPLN2Q9GZV7 340 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 PORCNQ9H237 461 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 DHX33Q9H6R0 707 aaKnown RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
COL25A1-202ENST00000399127 EPB41L5Q9HCM4 733 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 NCANO14594 1321 aa12.67□□□□□ -0.38
COL25A1-202ENST00000399127 ANKRD62A6NC57 917 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 TMEM110-MUSTN1A8MSY1 372 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 CLSTN1O94985 981 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 TNNI1P19237 187 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 MFAP3P55082 362 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 RTP1P59025 263 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 TMEM63BQ5T3F8 832 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 SYCE1Q8N0S2 351 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 C2orf69Q8N8R5 385 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 DEPTORQ8TB45 409 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 ZNF516Q92618 1163 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 NT5C1BQ96P26 610 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 CTTNBP2NLQ9P2B4 639 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 NOCTQ9UK39 431 aaKnown RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 AMFRQ9UKV5 643 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 STXBP5LQ9Y2K9 1186 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 NOC2LQ9Y3T9 749 aaKnown RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 PAPPA2Q9BXP8 1791 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 K7ERI5 159 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 RAD51CO43502 376 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 ZBTB48P10074 688 aaPredicted RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 CYP2C8P10632 490 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 ITGA4P13612 1032 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 KRT5P13647 590 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 CARSP49589 748 aaKnown RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 GPC3P51654 580 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 STAT5BP51692 787 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 MOGSQ13724 837 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 HSDL1Q3SXM5 330 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 HSP90B2PQ58FF3 399 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 GPAT2Q6NUI2 795 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 ADAT2Q7Z6V5 191 aaKnown RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 SHC3Q92529 594 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 ZNF668Q96K58 619 aaPredicted RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 SUCLA2Q9P2R7 463 aaPredicted RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 RBPJLQ9UBG7 517 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 AGO2Q9UKV8 859 aaKnown RBP12.66□□□□□ -0.38
COL25A1-202ENST00000399127 NFU1Q9UMS0 254 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 PTPRJQ12913 1337 aa12.66□□□□□ -0.38
COL25A1-202ENST00000399127 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
COL25A1-202ENST00000399127 PGRMC1O00264 195 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms