RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 VIMP08670 466 aaKnown RBP16.32■□□□□ 0.2
CFAP53-201ENST00000398545 RARRES1P49788 294 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 GPC3P51654 580 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 HSD17B4P51659 736 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 NCKAP1LP55160 1127 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
CFAP53-201ENST00000398545 PTK6Q13882 451 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 PPP1R7Q15435 360 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 KRT39Q6A163 491 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 ZNF746Q6NUN9 644 aaPredicted RBP16.32■□□□□ 0.2
CFAP53-201ENST00000398545 HAUS6Q7Z4H7 955 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 FAM228AQ86W67 206 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 GIMAP7Q8NHV1 300 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 CCHCR1Q8TD31 782 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 SNF8Q96H20 258 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 KREMEN1Q96MU8 473 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 CDC42EP4Q9H3Q1 356 aaKnown RBP16.32■□□□□ 0.2
CFAP53-201ENST00000398545 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 CXorf56Q9H5V9 222 aa16.32■□□□□ 0.2
CFAP53-201ENST00000398545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.32■□□□□ 0.2
CFAP53-201ENST00000398545 SMIM23A6NLE4 172 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 CYP11B1P15538 503 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 GTF2H1P32780 548 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 RRP1BQ14684 758 aaKnown RBP16.31■□□□□ 0.2
CFAP53-201ENST00000398545 SGO2Q562F6 1265 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 USP37Q86T82 979 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 EXOC3L1Q86VI1 746 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ELAC2Q9BQ52 826 aaKnown RBP16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ATP6V0A4Q9HBG4 840 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 TMEM8AQ9HCN3 771 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ZHX2Q9Y6X8 837 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ANKRD63C9JTQ0 380 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 CYP26A1O43174 497 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ATP6V1G2O95670 118 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 NF2P35240 595 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ECE1P42892 770 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 UBXN2AP68543 259 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 KRT17Q04695 432 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 KCTD19Q17RG1 926 aaPredicted RBP16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ACAD10Q6JQN1 1059 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 ENOSF1Q7L5Y1 443 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 PLEKHO2Q8TD55 490 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 TMC2Q8TDI7 906 aa16.31■□□□□ 0.2
CFAP53-201ENST00000398545 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
CFAP53-201ENST00000398545 AVENQ9NQS1 362 aaPredicted RBP16.31■□□□□ 0.2
CFAP53-201ENST00000398545 USP15Q9Y4E8 981 aaPredicted RBP16.31■□□□□ 0.2
CFAP53-201ENST00000398545 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 TCRBV7S2A1N4TA0A589 114 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 SUN1O94901 812 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 GAS8O95995 478 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 SLC1A1P43005 524 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 QARSP47897 775 aaKnown RBP16.3■□□□□ 0.2
CFAP53-201ENST00000398545 GHRHRQ02643 423 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 PPARDQ03181 441 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 PTP4A2Q12974 167 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 HIBCHQ6NVY1 386 aaPredicted RBP16.3■□□□□ 0.2
CFAP53-201ENST00000398545 CEP128Q6ZU80 1094 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 SLC47A2Q86VL8 602 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 ARHGEF2Q92974 986 aaKnown RBP16.3■□□□□ 0.2
CFAP53-201ENST00000398545 KAT5Q92993 513 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 NT5C1BQ96P26 610 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 PTPN22Q9Y2R2 807 aa16.3■□□□□ 0.2
CFAP53-201ENST00000398545 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
CFAP53-201ENST00000398545 SORBS3O60504 671 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 ATP2C2O75185 946 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 TTC4O95801 387 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 ADRB2P07550 413 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 MYBL1P10243 752 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 CENPCQ03188 943 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 SNRNP35Q16560 246 aaKnown RBP16.29■□□□□ 0.2
CFAP53-201ENST00000398545 LDHDQ86WU2 507 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 RELL1Q8IUW5 271 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 HELQQ8TDG4 1101 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 C7orf43Q8WVR3 580 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 DYDC1Q8WWB3 177 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 DDX1Q92499 740 aaKnown RBP16.29■□□□□ 0.2
CFAP53-201ENST00000398545 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 AAASQ9NRG9 546 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 TMOD2Q9NZR1 351 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 LGALS13Q9UHV8 139 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
CFAP53-201ENST00000398545 ADGRA3Q8IWK6 1321 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 TP73O15350 636 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 DHX15O43143 795 aaKnown RBP16.29■□□□□ 0.2
CFAP53-201ENST00000398545 ZC3H11AO75152 810 aaKnown RBP eCLIP16.29■□□□□ 0.2
CFAP53-201ENST00000398545 ITGB5P18084 799 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 CLEC16AQ2KHT3 1053 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.29■□□□□ 0.2
CFAP53-201ENST00000398545 CCDC25Q86WR0 208 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 C4orf19Q8IY42 314 aa16.29■□□□□ 0.2
CFAP53-201ENST00000398545 FBXL13Q8NEE6 735 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms