RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PLVAPQ9BX97 442 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 CAPN7Q9Y6W3 813 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 INO80B-WBP1J3KQ70 363 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 DHX15O43143 795 aaKnown RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 TRPC3Q13507 836 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 MIS18BP1Q6P0N0 1132 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF365Q70YC5 407 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 GPD1LQ8N335 351 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 KREMEN1Q96MU8 473 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 INO80BQ9C086 356 aaPredicted RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 AGO2Q9UKV8 859 aaKnown RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 PNMA2Q9UL42 364 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 TTC7AQ9ULT0 858 aaPredicted RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 UBIAD1Q9Y5Z9 338 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF862O60290 1169 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 LSP1P33241 339 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 RWDD2BP57060 319 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 ITIH3Q06033 890 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 ORC1Q13415 861 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 LRRC14Q15048 493 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 TTC31Q49AM3 519 aaPredicted RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 POTEAQ6S8J7 498 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 PARD3BQ8TEW8 1205 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 GMLQ99445 158 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 AZI2Q9H6S1 392 aa11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 RBAKQ9NYW8 714 aaPredicted RBP11.19□□□□□ -0.62
CPSF1P1-201ENST00000397477 RRM1P23921 792 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 SFNP31947 248 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 HSD17B4P51659 736 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 R3HDM1Q15032 1099 aaKnown RBP11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 PRUNE1Q86TP1 453 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 TRIM50Q86XT4 487 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 EPS8L1Q8TE68 723 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 CAVIN3Q969G5 261 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 CABS1Q96KC9 395 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 PSMD1Q99460 953 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF302Q9NR11 478 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 FEZ2Q9UHY8 353 aaPredicted RBP11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 DBR1Q9UK59 544 aaKnown RBP11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 RREB1Q92766 1687 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 DCDC2CA8MYV0 355 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ADSSP30520 456 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZNF131P52739 623 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 SLC29A2Q14542 456 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 FAM182AQ5T1J6 154 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 TMEM161BQ8NDZ6 487 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZBTB10Q96DT7 871 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 CYFIP2Q96F07 1278 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ADAM22Q9P0K1 906 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 FBXO40Q9UH90 709 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 PHF20L1A8MW92 1017 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 HLA-DRAP01903 254 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 PGK2P07205 417 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 PMS2P54278 862 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 NLRP11P59045 1033 aaKnown RBP11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ALCAMQ13740 583 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 ERP44Q9BS26 406 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 SLITRK6Q9H5Y7 841 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 A1CFQ9NQ94 594 aaKnown RBP11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 CYP26B1Q9NR63 512 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 CD2APQ9Y5K6 639 aa11.18□□□□□ -0.62
CPSF1P1-201ENST00000397477 NHSQ6T4R5 1651 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 PIK3R2O00459 728 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 ECEL1O95672 775 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 PPATQ06203 517 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 EMC2Q15006 297 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 STXBP2Q15833 593 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 LIN9Q5TKA1 542 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 CCDC121Q6ZUS5 278 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 C4orf19Q8IY42 314 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 SPIRE2Q8WWL2 714 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 BORCS6Q96GS4 357 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 TMEM8AQ9HCN3 771 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 DMAC2Q9NW81 257 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 GGT7Q9UJ14 662 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 HMGB1P1B2RPK0 211 aaPredicted RBP11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 PPP1R37O75864 691 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 SHBGP04278 402 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 CETN2P41208 172 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 TMEM132BQ14DG7 1078 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 ZBTB41Q5SVQ8 909 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 DCAF12L1Q5VU92 463 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 FOXR2Q6PJQ5 311 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 IQCKQ8N0W5 287 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 MCPH1Q8NEM0 835 aa11.17□□□□□ -0.62
CPSF1P1-201ENST00000397477 THOC1Q96FV9 657 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms