RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 STAG3L1P0CL83 205 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 FAM189BP81408 668 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 MRPL10Q7Z7H8 261 aaKnown RBP25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 ZC3H3Q8IXZ2 948 aaKnown RBP25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 HACE1Q8IYU2 909 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 AOPEPQ8N6M6 819 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 RDH13Q8NBN7 331 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.71■■□□□ 1.712e-12■□□□□ 9.2
TSPAN4-203ENST00000397397 CCDC94Q9BW85 323 aaPredicted RBP25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 SRRTQ9BXP5 876 aaKnown RBP25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 KIAA1586Q9HCI6 787 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 ITGA4P13612 1032 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 TNFSF9P41273 254 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 CASP4P49662 377 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 HSP90AA2PQ14568 343 aaPredicted RBP25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 SPATA1Q5VX52 437 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 LRRC55Q6ZSA7 311 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 TMEM192Q8IY95 271 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 PGBD4Q96DM1 585 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 CEP63Q96MT8 703 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 PARP2Q9UGN5 583 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 FRMD4BQ9Y2L6 1034 aa25.71■■□□□ 1.71
TSPAN4-203ENST00000397397 ZBBXA8MT70 800 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 FGFR1OPO95684 399 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 CLTAP09496 248 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 AKAP5P24588 427 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 MYL5Q02045 173 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 CRELD2Q6UXH1 353 aaPredicted RBP25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 CBWD2Q8IUF1 395 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 LPPQ93052 612 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 FBXL18Q96ME1 805 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 ACAP3Q96P50 834 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 RNF39Q9H2S5 420 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 CBX8Q9HC52 389 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 CPSF3Q9UKF6 684 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 NFE2L3Q9Y4A8 694 aa25.7■■□□□ 1.7
TSPAN4-203ENST00000397397 ZNF233A6NK53 670 aa25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 EOMESO95936 686 aa25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 AMHP03971 560 aa25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 ATF7P17544 494 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 BMP8BP34820 402 aa25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 KCNJ6P48051 423 aa25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 WDR5P61964 334 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 SNRNP35Q16560 246 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 ZNF598Q86UK7 904 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 ELAC1Q9H777 363 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 RPF1Q9H9Y2 349 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 RNF216Q9NWF9 866 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 LRFN2Q9ULH4 789 aa25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 PCDHB7Q9Y5E2 793 aa25.69■■□□□ 1.7
TSPAN4-203ENST00000397397 SMTNL1A8MU46 457 aa25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 TULP1O00294 542 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 AKAP3O75969 853 aa25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 RECQL4O94761 1208 aa25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 EPB41P11171 864 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 PSMC2P35998 433 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 YARSP54577 528 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 FILIP1Q7Z7B0 1213 aa25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 DHX40Q8IX18 779 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 HERVK_113Q902F9 699 aa25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 TMEM161AQ9NX61 479 aa25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 TTC3P53804 2025 aa25.68■■□□□ 1.7
TSPAN4-203ENST00000397397 MEIS3P2A8K0S8 358 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 BECN2A8MW95 431 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 IKBKBO14920 756 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 ADRB2P07550 413 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 CXCL8P10145 99 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 IQCB1Q15051 598 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 ENOX2Q16206 610 aaKnown RBP25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 NPAS4Q8IUM7 802 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 FAM186BQ8IYM0 893 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 FAM200AQ8TCP9 573 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 MKNK1Q9BUB5 465 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 RBAKQ9NYW8 714 aaPredicted RBP25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 CITO14578 2027 aa25.67■■□□□ 1.7
TSPAN4-203ENST00000397397 SLC16A3O15427 465 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 DEFB103AP81534 67 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 NCAPHQ15003 741 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 AGMOQ6ZNB7 445 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 BRSK2Q8IWQ3 736 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 FAM212AQ96EL1 285 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 UBE2OQ9C0C9 1292 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 MTIF3Q9H2K0 278 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 THAP9Q9H5L6 903 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 TOPORSQ9NS56 1045 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 KLK14Q9P0G3 267 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 GIT1Q9Y2X7 761 aa25.66■■□□□ 1.7
TSPAN4-203ENST00000397397 MAPK13O15264 365 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 UPP2O95045 317 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 CYP24A1Q07973 514 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 SLC10A6Q3KNW5 377 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 CCDC40Q4G0X9 1142 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 RSAD1Q9HA92 442 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 UBN1Q9NPG3 1134 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 SAMSN1Q9NSI8 373 aaKnown RBP25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 FANCLQ9NW38 375 aa25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 RANBP2P49792 3224 aaKnown RBP25.65■■□□□ 1.7
TSPAN4-203ENST00000397397 GNA14O95837 355 aa25.64■■□□□ 1.7
TSPAN4-203ENST00000397397 FXR1P51114 621 aaKnown RBP eCLIP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms