RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 EXOC3O60645 756 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 GH1P01241 217 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 ALAS1P13196 640 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 ZNF76P36508 570 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 GABPAQ06546 454 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 RRP1BQ14684 758 aaKnown RBP9.81□□□□□ -0.84
CAPN3-206ENST00000397163 PHLDB3Q6NSJ2 640 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 UCMAQ8WVF2 138 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 CKAP2Q8WWK9 683 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 RMDN2Q96LZ7 410 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 MBOAT7Q96N66 472 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 EIF2AK1Q9BQI3 630 aaKnown RBP9.81□□□□□ -0.84
CAPN3-206ENST00000397163 MKNK1Q9BUB5 465 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 OLFML3Q9NRN5 406 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 SERPINB13Q9UIV8 391 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 ATAD5Q96QE3 1844 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 FRMPD4Q14CM0 1322 aa9.81□□□□□ -0.84
CAPN3-206ENST00000397163 EIF3DO15371 548 aaKnown RBP eCLIP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 LUC7L3O95232 432 aaKnown RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 GJB6O95452 261 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 SNAP25P60880 206 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 AP3B2Q13367 1082 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 KIF22Q14807 665 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 MOXD1Q6UVY6 613 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 RNF207Q6ZRF8 634 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 MIGA2Q7L4E1 593 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 TPH2Q8IWU9 490 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 C1orf54Q8WWF1 131 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 BTBD6Q96KE9 485 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 TMEM237Q96Q45 408 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 WNT8AQ9H1J5 351 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 ETNK1Q9HBU6 452 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 NKIRAS1Q9NYS0 192 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 TBK1Q9UHD2 729 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 DAGLAQ9Y4D2 1042 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 ZMYM2Q9UBW7 1377 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 FAM86B1E9PN63 330 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 SMAPO00193 183 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 MEIS2O14770 477 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 TBX3O15119 743 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 FAM86B2P0C5J1 330 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 PEX5P50542 639 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 GPSM2P81274 684 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 ARHGAP22Q7Z5H3 698 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 CPNE8Q86YQ8 564 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 FAM178BQ8IXR5 827 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 SYCP3Q8IZU3 236 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 FBF1Q8TES7 1133 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 PAIP2Q9BPZ3 127 aaKnown RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 UBE2OQ9C0C9 1292 aaKnown RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 PARVGQ9HBI0 331 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 AGPAT3Q9NRZ7 376 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 PCMTD2Q9NV79 361 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 EML1O00423 815 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 GNPATO15228 680 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 MSH4O15457 936 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 THAP12O43422 761 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 CHMP2AO43633 222 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 HIP1RO75146 1068 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 DLATP10515 647 aaKnown RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 CHKAP35790 457 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 HADHBP55084 474 aaKnown RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 KRT17Q04695 432 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 TNIP1Q15025 636 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 TRIP13Q15645 432 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 KYNUQ16719 465 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 USH1GQ495M9 461 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 INTS8Q75QN2 995 aaKnown RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 FAM163AQ96GL9 167 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 FAM20AQ96MK3 541 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 P2RX7Q99572 595 aaKnown RBP9.8□□□□□ -0.84
CAPN3-206ENST00000397163 GORASP1Q9BQQ3 440 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 DNAJC18Q9H819 358 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
CAPN3-206ENST00000397163 SBF2Q86WG5 1849 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 CLDN3O15551 220 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 IKQ13123 557 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-206ENST00000397163 MPP2Q14168 576 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 CYP1B1Q16678 543 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 Q4G0T1 1027 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 SGO2Q562F6 1265 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 SLC30A10Q6XR72 485 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 ARHGEF18Q6ZSZ5 1173 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 SEPT14Q6ZU15 432 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 STXBP4Q6ZWJ1 553 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 SRRM1Q8IYB3 904 aaKnown RBP9.79□□□□□ -0.84
CAPN3-206ENST00000397163 CYP2W1Q8TAV3 490 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 RAB3IPQ96QF0 476 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-206ENST00000397163 AAASQ9NRG9 546 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 GAKO14976 1311 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 SLURP2P0DP57 97 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 VPS41P49754 854 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 CETN1Q12798 172 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 BFSP1Q12934 665 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 MKRN3Q13064 507 aaKnown RBP9.79□□□□□ -0.84
CAPN3-206ENST00000397163 HHATQ5VTY9 493 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 ASRGL1Q7L266 308 aa9.79□□□□□ -0.84
CAPN3-206ENST00000397163 GALNT15Q8N3T1 639 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms