RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TBX10O75333 385 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 RECQL4O94761 1208 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 FAM13AO94988 1023 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 YEATS4O95619 227 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 MBD3O95983 291 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 DNM1Q05193 864 aaKnown RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 DLX2Q07687 328 aaPredicted RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 SPECC1Q5M775 1068 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 RRAGBQ5VZM2 374 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 TMEM184AQ6ZMB5 413 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 USP49Q70CQ1 688 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 TAS1R3Q7RTX0 852 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 LINC00301Q8NCQ3 95 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 TMEM161BQ8NDZ6 487 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 BCL7CQ8WUZ0 217 aaPredicted RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 KCNN1Q92952 543 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 MSLNLQ96KJ4 702 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 CLIC6Q96NY7 704 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 REEP2Q9BRK0 252 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 TARS2Q9BW92 718 aaKnown RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 XIRP2A4UGR9 3374 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 PPP6R2O75170 966 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 THP07101 528 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 MAPTP10636 758 aaKnown RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 ABCD1P33897 745 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 CA8P35219 290 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 ZNF131P52739 623 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 KRT85P78386 507 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 SMAD4Q13485 552 aaKnown RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 ZNF568Q3ZCX4 644 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 MYCT1Q8N699 235 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 LRRC15Q8TF66 581 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 TCHPQ9BT92 498 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 CCDC94Q9BW85 323 aaPredicted RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 PTPRHQ9HD43 1115 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 CLEC1BQ9P126 229 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 SSX2IPQ9Y2D8 614 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
SEC13-208ENST00000397109 PRG3Q9Y2Y8 225 aaPredicted RBP15.97■□□□□ 0.15
SEC13-208ENST00000397109 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.14
SEC13-208ENST00000397109 SPTLC2O15270 562 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 TBCAO75347 108 aaKnown RBP15.96■□□□□ 0.14
SEC13-208ENST00000397109 GLP2RO95838 553 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 MCF2P10911 925 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 GRM5P41594 1212 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 NCKAP1LP55160 1127 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.14
SEC13-208ENST00000397109 COASYQ13057 564 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 TUSC3Q13454 348 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 MPZL3Q6UWV2 235 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 ZPBP2Q6X784 338 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 FAM178BQ8IXR5 827 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 NECAB3Q96P71 396 aaPredicted RBP15.96■□□□□ 0.14
SEC13-208ENST00000397109 CDT1Q9H211 546 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 TOPORSQ9NS56 1045 aaPredicted RBP15.96■□□□□ 0.14
SEC13-208ENST00000397109 TFIP11Q9UBB9 837 aaKnown RBP15.96■□□□□ 0.14
SEC13-208ENST00000397109 PRKAG3Q9UGI9 489 aa15.96■□□□□ 0.14
SEC13-208ENST00000397109 MBTPS2O43462 519 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 TOM1L1O75674 476 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 SOD2P04179 222 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 IL9P15248 144 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 HOXB8P17481 243 aaPredicted RBP15.95■□□□□ 0.14
SEC13-208ENST00000397109 PROZP22891 400 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 YARSP54577 528 aaKnown RBP15.95■□□□□ 0.14
SEC13-208ENST00000397109 KCNC3Q14003 757 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 CLUL1Q15846 466 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 SV2BQ7L1I2 683 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 HAUS6Q7Z4H7 955 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 PPFIBP1Q86W92 1011 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 SMRP1Q8NCR6 262 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 CASP10Q92851 521 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 HERC2P3Q9BVR0 1158 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 VN1R3Q9BXE9 311 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 EMILIN2Q9BXX0 1053 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 SCAND2PQ9GZW5 306 aaPredicted RBP15.95■□□□□ 0.14
SEC13-208ENST00000397109 ZHX3Q9H4I2 956 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 MRPL17Q9NRX2 175 aaKnown RBP15.95■□□□□ 0.14
SEC13-208ENST00000397109 MARCH5Q9NX47 278 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
SEC13-208ENST00000397109 BARX2Q9UMQ3 279 aaPredicted RBP15.95■□□□□ 0.14
SEC13-208ENST00000397109 PTGESO14684 152 aa15.94■□□□□ 0.14
SEC13-208ENST00000397109 CLASP2O75122 1294 aaKnown RBP15.94■□□□□ 0.14
SEC13-208ENST00000397109 PRPF40AO75400 957 aaKnown RBP15.94■□□□□ 0.14
SEC13-208ENST00000397109 URODP06132 367 aa15.94■□□□□ 0.14
SEC13-208ENST00000397109 SMAD2Q15796 467 aaKnown RBP15.94■□□□□ 0.14
SEC13-208ENST00000397109 FOXD4L6Q3SYB3 417 aaPredicted RBP15.94■□□□□ 0.14
SEC13-208ENST00000397109 FOXD4L3Q6VB84 417 aaPredicted RBP15.94■□□□□ 0.14
SEC13-208ENST00000397109 GPR65Q8IYL9 337 aa15.94■□□□□ 0.14
SEC13-208ENST00000397109 VN1R2Q8NFZ6 395 aa15.94■□□□□ 0.14
SEC13-208ENST00000397109 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
SEC13-208ENST00000397109 BDP1A6H8Y1 2624 aa15.94■□□□□ 0.14
SEC13-208ENST00000397109 CLDN3O15551 220 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 CUTAO60888 179 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 TADA2AO75478 443 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 STAT6P42226 847 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 HSP90AA2PQ14568 343 aaPredicted RBP15.93■□□□□ 0.14
SEC13-208ENST00000397109 NOLC1Q14978 699 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■■■■■ 27.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms